Sphingobacterium sp. ML3W: KO02_18535
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Entry
KO02_18535 CDS
T03258
Name
(GenBank) peptidase C39
KO
K20344
ATP-binding cassette, subfamily C, bacteriocin exporter
Organism
sht
Sphingobacterium sp. ML3W
Pathway
sht02010
ABC transporters
sht02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sht00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
KO02_18535
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
KO02_18535
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sht01002
]
KO02_18535
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sht02000
]
KO02_18535
Peptidases and inhibitors [BR:
sht01002
]
Cysteine peptidases
Family C39
KO02_18535
Transporters [BR:
sht02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
KO02_18535
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
Peptidase_C39
ABC_tran
ABC_ATPase
SMC_N
AAA_22
AAA_29
Peptidase_C39_2
AAA_23
AAA_30
nSTAND3
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
AIM38465
LinkDB
All DBs
Position
complement(4153402..4155564)
Genome browser
AA seq
720 aa
AA seq
DB search
MKKSPVRIKQHDIRDCGAACLASVASYYGSDIPIAKIRQHCHTDTRGTNVLGMIQGLQEL
GFTAKGVKGAIDAIPQIPLPAIAHVVLNGQLQHYIVIYQVHKGQVTVMDPGLGKVQQYSI
EEFQKIWTGVLILLEPNEYFKQRNEKTNVYNRFWNLIKPHKSIVLQALVGAVVYTLLGLS
SSLYIQKITDFVLVDGNVRLLNLLSVAMLVILFFQVIIGTLKSVMVLQTGQRIDRYLILG
YYKHLLSLPQRFFDTMKVGEIISRVNDAVKIRAFINDVAIQAVVNVLIVVFSFALMFSYF
WKLALIILLVIPFYFFVYWLTNKLNKKVERRLMEEGAELESHLVESLTSVKTIKQFGMET
YFNSGTDHKFTYLLKTIYSSVLNGLFSGTSSEFLSRLFTIILLWAGSYYVIDRTITPGEL
LSFYALIGYLTGPVSQLIGMNKTLQNALIAADRLFEIMDLEREENEGKLDLVSNEVGDIL
FENIRFSYGSRVEVFKDFSCRIEKGKMTAIIGESGSGKTTLGALIQQLYPVQSGKIHIGQ
YDLNYISKQSLRERIAIVPQQIDLFSGNVIENIAVGEEVPNFQRLMTVVKELDMMSFIEK
LPSGFETYLGENGSMLSGGQRQRIAIARALYRDPDILILDEATSALDTGTELVIQRAFDR
FRAAGKTMLVIAHRLSTIAGADTIMVMQDGQIVEQGSHEQLLLTASAYRDMWKKQSVILD
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatctccagtccgtattaagcaacatgatatccgtgattgcggggcagcctgt
ttagcctctgttgcaagttattatgggtcagatattccaatagcaaaaatacgacagcat
tgccacaccgatacccgaggtaccaacgtacttggcatgatccaaggattacaggaatta
gggtttacagctaaaggagtgaaaggagctatagatgccataccacaaatccctttacca
gcgattgcacacgtcgttttaaatggtcaattgcagcactatattgtcatttatcaagtc
cataagggtcaggtcacggtaatggatcccggtctggggaaagtccaacaatacagtata
gaagaatttcagaaaatctggactggcgtgttgatcttattagaacccaatgaatatttt
aagcagcggaatgagaaaactaatgtttacaatcgtttttggaatctgataaaaccacat
aaatcgattgttttacaagcattagtcggtgcagttgtttataccttactcggtttgtcc
tcttcactttatatccaaaagattaccgattttgtacttgtagatggcaatgttcgttta
ctcaatttactctcggtcgccatgttggttattttgttctttcaagtaatcatcggtacg
ctcaaaagcgtcatggtgttacaaaccggacaacggattgatcgctacctgatcttgggc
tattacaaacatttactaagtcttccacagcgtttttttgacacgatgaaagtcggagag
attatatcgagagtaaatgatgcagtcaaaattcgggcatttatcaatgatgttgccatt
caggccgtcgttaatgttttaattgttgtgttctcatttgctttaatgttctcttatttc
tggaaactggcattgattattttattggtcattcctttttatttctttgtctattggtta
accaataagttgaataaaaaagtggaacgccggcttatggaagaaggagctgaactggaa
tcgcatctagtcgaatcactcacttcagtcaagaccatcaaacagtttggtatggagacc
tatttcaatagcggtactgatcacaaattcacctatctcttgaagaccatttactcgtcc
gtattgaatggacttttctctgggacatcgagtgaatttctctcccgcctgtttacaatt
attttactctgggctggatcctattatgtgattgatcgtacgattacaccgggcgagttg
ttatcattttatgctttgatcggatacttaacaggacccgttagtcaattgatcggaatg
aataaaacattgcaaaatgcattgattgctgccgaccgcttgtttgaaattatggatctt
gagcgagaagaaaatgaaggtaaactggatttggtgagcaatgaagtcggtgatatttta
tttgaaaatatacggttctcctatggatctcgagtcgaagtgttcaaagacttcagttgt
cgaatagaaaaaggcaaaatgactgctatcataggtgagagtggaagtggcaaaactact
ttaggagcactgatccagcaattgtatcctgtccaatcggggaagattcatattggacaa
tatgatcttaattatatttctaagcaatctcttcgagagcgcatcgcaatcgttccgcag
cagattgatcttttctctggtaatgttatcgaaaatattgctgtaggggaagaagttcca
aatttccaacgtttgatgactgtcgttaaagaattggatatgatgtcgttcattgaaaaa
ctaccctcaggtttcgaaacctatttaggagaaaatggctctatgttatccggtggacaa
agacagcgtattgccattgctagagcactttatcgcgatccggatatcttgattcttgat
gaagcaacatcagcgttagataccgggaccgagttggttattcaacgtgcttttgaccga
tttagagcagccggtaaaaccatgctcgttattgctcaccgattgagtaccatagcaggg
gcagataccatcatggttatgcaagatggtcagattgtcgaacaaggtagtcatgaacaa
ctgttattgacagcgtcagcttatagagatatgtggaaaaagcaatccgttattctagat
tga
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