Sphingobacterium sp. ML3W: KO02_19395
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Entry
KO02_19395 CDS
T03258
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
sht
Sphingobacterium sp. ML3W
Pathway
sht03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sht00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KO02_19395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sht03400
]
KO02_19395
Enzymes [BR:
sht01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KO02_19395
DNA repair and recombination proteins [BR:
sht03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KO02_19395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
Zn_ribbon_PriA
Helicase_C
PriA_C
WHD_PriA
nSTAND3
DUF1344
Motif
Other DBs
NCBI-ProteinID:
AIM38616
LinkDB
All DBs
Position
complement(4346497..4348980)
Genome browser
AA seq
827 aa
AA seq
DB search
MPEPQNLFFTDRATVFVDVILPLALANTYTYRIPVEWNDKIQVGVRVMVQFGKNKIYSAI
VKQISKEAPKHYEAKYILDIIDEKPIVDGAQLLLWDWISDYYMCSLGEVMQAALPSALKL
ASETKIVSAIPDDFDRSSLTDKEYLIIEALEVAGELKVNDIVKLLSQKSVFPILKTMFDK
GIVLISEEITERYKPKTKVFFSFAPEFREEEGKRTLLDALNRAPKQQDAVLAFMQLLKKG
EEITRQMIMEASGCGSGAVTALIDKGVFLVKEKVVSRFQGEDVELDANFEFNTNQQRVYE
EIQHCFESKDVTLLHGVTASGKTQLYIRLIEQAIAAGKSALYLLPEIALTAQITARLKLH
FGDKLGVYHSKFNDNERAEVWHKVMKNEFQIIVGARSSIFLPFQDLGIIIVDEEHESSYK
QYDPAPRYHARDTAIYLGYIHQTKVLLGSATPSIESFYNAKSNKYGFVQLLERFGNAQLP
DIHIVDIPMEGRKENMFSYFSGTLLKAIEAALERKEQVILFQNRRGHTTIIQCNTCGFVA
KCINCDVSMTYHKSSNMMHCHYCGHVEPPIKICPACGMPHIESKGFGTERVEEELELLMP
NARIARLDLDSTKGKNGFDKIIGAFDEHEFDILIGTQMVAKGLDFGRVSLIGIINADTMI
NFPDFRAYERAFSLFLQVAGRAGRREAGGQVIIQTYTPKHRVLEQVVAHDYQGMFDTEVK
ERKNFAYPPFYRVIRIDIKHMDIQKCYDGAKKFASGLRQQLGSRVLGPETPLVGRVRNYF
IQTITLKIERNNISIVKVKDLIKLVKNDFIADKANAGARVVIDVDPY
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgccagagcctcaaaatttatttttcacagaccgagcgactgtttttgtcgatgttatt
ttgcctttagctttagccaatacctatacttatcgtattcctgtcgaatggaacgataag
attcaggtcggtgttcgtgttatggtgcaatttggtaagaataagatctattctgccatc
gtcaagcaaataagcaaagaagcaccaaaacactacgaagcgaaatatatattagatatc
attgatgagaaacctatcgttgatggtgcgcaattattgctgtgggattggatctctgat
tattatatgtgctccttgggagaggttatgcaggcagcactgccgtcggcactgaaactc
gccagcgaaactaaaatcgtatcggcaattcccgacgatttcgatcgctcatctttgacg
gataaagaatacttaattatcgaagcgcttgaggtagctggagaattgaaagtcaatgat
atcgttaagctattaagtcaaaaatcggtatttccgatattgaaaacgatgtttgataag
ggtattgtgttgatttccgaagagataacagaaaggtataaaccaaaaacgaaggttttt
ttctcctttgctccagaatttcgcgaggaagagggcaaacgcacgttgctggatgcatta
aatcgagctccaaaacagcaagatgccgtattggcttttatgcaactgttgaaaaagggc
gaagagataacccgacagatgatcatggaagcttcgggatgtggctcaggggctgttacg
gcattaatcgataaaggtgtattcctagtaaaggagaaagtggtcagtcgttttcagggg
gaagatgtagaattggatgctaattttgagtttaataccaatcagcagcgtgtctatgaa
gagattcaacattgtttcgaaagcaaagatgttaccttgttgcacggagtcacagcgtcc
ggaaaaacacaactctatattagacttatcgagcaagcaatagcagcgggtaagtctgca
ttatacctattacccgaaattgccttgacggcacagataaccgctcggttgaaattgcat
tttggcgataagttgggcgtttatcattctaagtttaatgataatgaacgtgctgaggta
tggcataaagtgatgaaaaatgaattccagattattgttggagcacgttcttctatattt
ttaccatttcaagacctgggaattattattgttgatgaggaacatgagagctcctataaa
cagtatgatcccgcaccacgttatcacgctcgcgatacagcaatctatttaggatatatc
catcagactaaagttctattgggctctgcaacaccctctattgagagtttttataatgca
aaatcaaataaatatggatttgtacaacttttagagcgttttggtaatgcgcaactaccc
gatatccatattgtcgatattccaatggaaggaagaaaggaaaatatgttttcttatttc
tccggaactttattgaaggcaatagaagctgctttggaacgcaaggagcaagtgatactg
tttcaaaaccgacgtggtcataccaccattattcaatgtaatacctgtggtttcgtagct
aaatgtatcaattgtgatgtcagtatgacgtatcataaaagttcaaatatgatgcattgt
cattattgtggccatgtggaacctccgattaaaatatgtcctgcttgtgggatgccacat
atcgaaagcaagggctttggaacagagcgggtagaggaagaattggagttgttgatgcct
aatgcacgtattgcacgtttggatctagactccaccaagggtaagaatggttttgataaa
atcataggtgcatttgatgaacatgagtttgatatcctgatcggaacgcagatggtggca
aaaggattggattttggacgcgttagtttaatcgggattatcaatgccgatacgatgatt
aattttcctgacttcagagcatatgaaagggctttttcacttttcttacaggtggccgga
cgtgccggacgtagagaagcaggtgggcaggtaatcattcagacctatacaccaaaacat
cgcgttttggagcaggtggtcgcacatgattaccaagggatgtttgatacggaagttaaa
gaacgtaagaattttgcctatccaccattttatcgcgtcatccgaattgatatcaagcat
atggatatccaaaaatgttatgatggcgctaagaaatttgcatcaggattgcgacagcag
ctcggttcacgtgttttaggacccgaaacgccactggtaggaagagtacgaaactacttt
attcagaccattacgttaaagattgaaagaaataatatcagtattgtgaaagtaaaagat
ttgatcaagctggtaaagaacgattttattgccgataaagcaaatgctggagcacgtgtt
gtgattgatgtagacccttattag
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