KEGG   Staphylococcus hyicus: SHYC_00240
Entry
SHYC_00240        CDS       T03578                                 
Symbol
hsdR
Name
(GenBank) type I restriction-modification system endonuclease HsdR
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
shu  Staphylococcus hyicus
Brite
KEGG Orthology (KO) [BR:shu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:shu02048]
    SHYC_00240 (hsdR)
Enzymes [BR:shu01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     SHYC_00240 (hsdR)
Prokaryotic defense system [BR:shu02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   SHYC_00240 (hsdR)
SSDB
Motif
Pfam: T1RH-like_C SWI2_SNF2 HSDR_N T1R_D3-like ResIII DEAD
Other DBs
NCBI-ProteinID: AJC94877
LinkDB
Position
46045..49167
AA seq 1040 aa
MSFQFSEDDLEQVALKWFEGLGYSVKNGRDSGENGIMNERESDKDVVLDDRLEAALRRIN
PELNNSAIEQAIREISIEKSPSLLENNRSFHEMITNGIEVEHYNDDGETINDLVYVFDFD
NPGNNDFLAVNQLTVVNGDYKKRPDIVLFINGLPVVVIELKNSTNESVGIEDGYHQLETY
KMRIPQLFNHNAVLVTSDGVNTKAGSITADYDRFMTWRTKDGKTEDSSTFRSLDILIHGM
LNKEVLLDLIRHFVLFQDDGKGHIVKILAAYHQYYAVNKAIDRAMEATSEHGDGKGGVIW
HTQGSGKSLTMVFFSGKLIQKLNNPTLVVVTDRNDLDNQLYGTFVKSKGRSGKGLLRQTP
KQANSRKELKELLSVESGGIIFTTMQKFEPDEGRATMDALTDRKNVVVMADEAHRTQYGF
KATYDEKGEGIKYGYAKYLRDALPNASFVGFTGTPVSSTDKNTQMVFGNYIDVYDMTQSV
EDGSTVKIYYESRIIPLNLPSDLDIDEAYNVITSGQEEDTKSRLKSKWSRIEALSGAEQR
IHALATDIINHFETRQKAMKGKGMIVTMSRRIAVDLYDEIVRLKPKWHSDDDDKGVIKVV
MTGSSSDPQNFQKHIGPKKRRNLLEKRMKDVNDELQLVIVRDMWLTGFDVPSMHTMYIDK
PMKGHNLMQAIARVNRVFKDKPGGLIVDYVGIAESLKEALKEYTDSDREQTGIDTDKALE
VMLMKYDIIQDMLYNHDYSDFESEDQLNRYNAISNTMDYIIGLGEKERERFIKTVTELSK
AFALCATEEAAQELNSEIAFLKAVKSGLVKLLAPPTDASERKKTSAEIEAEINQLISKSV
VTEEVVDIYQTLGIENPDISILSDEFLKDVEGLQQKNVAVELLNKLLKGQVKSLMKTNTT
VSKRFSEMLSKSIQKYNNRSIEASKVIEELIQMAKEINQEKQRGKDLGLSTEEIAFYDAL
ASHETAKEAMGDKELRAIAHELTKTVKNNMSVDWSKRESAKAKMRVQVRRLLKKYGYPPD
LQKMAVEQVVEQAELMASQQ
NT seq 3123 nt   +upstreamnt  +downstreamnt
atgagctttcaatttagtgaagatgatttagaacaggtggcattgaagtggtttgagggt
cttggttattctgttaagaatggtcgagatagtggtgaaaatgggattatgaatgaacgg
gagagcgacaaagatgttgtgcttgatgatcgtttggaagcggctttgagacgtattaat
cctgaactaaataatagtgcaattgaacaggcaattcgtgaaatttctattgagaagtcg
cctagtttattagagaataaccgttctttccatgaaatgattacaaatggtattgaggtt
gaacactataatgatgacggtgaaacgattaatgatttggtgtatgtattcgactttgat
aacccgggaaataatgattttttagcggttaatcagttaactgttgtgaatggggattat
aaaaaacgacctgatattgtgttattcataaatggattaccagtagtggtcattgaactg
aaaaattctacaaatgaatctgttggtattgaagacgggtatcatcagttagaaacttat
aaaatgagaattccacaattatttaatcataatgcagtattagtaacaagtgatggtgtt
aatacaaaagctggttctataactgctgattatgaccgttttatgacttggcgcactaaa
gatggaaagactgaagattcatcaacgtttcgtagtttagatatattgattcatgggatg
ttaaacaaagaagtactattagatttaatacgtcattttgttttgttccaagatgacggt
aaaggacatatagttaaaatattagctgcataccatcaatattatgcagtgaataaagct
attgatcgtgctatggaagcaacatctgaacatggagatggcaaggggggcgttatttgg
cacacacaaggttctggtaagagtttgacaatggttttcttctcaggaaagttaattcaa
aaattaaataatccaacattagtggtcgtaacagaccgtaatgacttagacaatcaattg
tatggtacttttgttaaatccaaagggcgctcaggtaaaggattactaagacaaacacct
aaacaagcaaattcacgtaaagaattgaaagaactattatcggttgaatccggtggtatc
atatttacaactatgcagaaatttgaacctgatgaaggccgagcgacaatggatgcttta
acagaccgtaaaaatgtagttgttatggcggacgaagcacaccgcacacaatatggtttt
aaagcaacttacgatgaaaaaggtgaaggtattaaatatggttatgcaaaatatttaaga
gatgctttacccaacgcttcatttgttggctttactggaacacctgtatcttcaacagat
aagaatacacaaatggtattcggtaattatattgatgtatatgatatgacacaatctgta
gaagatggtagtacggttaaaatatactatgaaagtcgtattattccattaaatttacca
agcgatttagatattgatgaagcatataatgtcattacctctggccaagaagaagatact
aaatctcgattgaaatctaaatggtcacgtatagaagcactatctggtgcagagcaacgt
atacatgctttagcaactgacattattaatcactttgaaacaaggcagaaggcaatgaaa
ggtaaaggtatgattgtcacaatgagtcgtcgtattgcagtcgatttatatgatgaaatt
gtaaggctaaaaccaaaatggcattcagacgatgatgacaaaggtgttatcaaagtggtt
atgacaggttcatcaagcgatcctcaaaacttccaaaaacatataggtccgaaaaagaga
agaaaccttctagagaagcgcatgaaagatgttaatgatgaattgcaactcgtaattgtg
cgagacatgtggttaacaggatttgatgtaccttcaatgcatacaatgtacatagataaa
ccgatgaaaggtcataatttaatgcaagctattgcgcgtgttaatagagtatttaaagat
aaaccaggcggcttaattgttgattatgtaggtattgctgaaagtctgaaggaagcatta
aaagagtatacggactctgatagagaacaaacaggcatagacacagataaagctcttgaa
gttatgttaatgaaatacgatatcatacaagatatgctatataaccatgactattctgac
tttgagtcagaagatcaattaaatcgctataatgctatctcaaatacgatggattatatc
attggattaggtgagaaagaaagagagcgatttataaaaacagtgacagagctttctaag
gcatttgcattatgtgcgacagaggaagcagcacaagaactgaatagcgaaattgcattt
ttaaaagctgtaaaatctggtcttgttaagttgttagctccacctactgatgcaagtgag
cgtaaaaagacatctgctgaaatagaagcagaaataaatcaattaatttcaaaatcagtg
gtgactgaagaagttgtagatatttatcaaacacttggaatagaaaatccagatatctca
atattgtcagatgaattcttaaaagatgtagaaggacttcaacaaaaaaatgtagcggtt
gaattgttgaacaaattacttaaaggacaagttaaatcattaatgaaaacaaatactact
gtatctaagaggttttctgagatgctaagtaaatcaatacaaaaatacaataaccgttct
attgaagcttcaaaagttatagaagaattgattcaaatggcgaaagaaataaatcaagaa
aaacaacgaggaaaagacttaggtctgagcacggaggaaattgctttttatgatgcatta
gcctctcatgaaactgcaaaagaagcaatgggggataaagaattacgagctattgcacat
gaattaacaaaaacggtcaagaataatatgagtgtagactggtcaaaacgtgagagcgca
aaggctaaaatgagagtccaagtaagacgactattaaagaaatatggttacccacctgat
cttcaaaaaatggctgtagaacaagttgtagaacaagcagaactaatggccagccaacaa
taa

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