Staphylococcus hyicus: SHYC_04120
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Entry
SHYC_04120 CDS
T03578
Symbol
groEL
Name
(GenBank) molecular chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
shu
Staphylococcus hyicus
Pathway
shu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
shu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SHYC_04120 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shu03019
]
SHYC_04120 (groEL)
03110 Chaperones and folding catalysts [BR:
shu03110
]
SHYC_04120 (groEL)
03029 Mitochondrial biogenesis [BR:
shu03029
]
SHYC_04120 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
shu04147
]
SHYC_04120 (groEL)
Enzymes [BR:
shu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
SHYC_04120 (groEL)
Messenger RNA biogenesis [BR:
shu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SHYC_04120 (groEL)
Chaperones and folding catalysts [BR:
shu03110
]
Heat shock proteins
HSP60 / Chaperonin
SHYC_04120 (groEL)
Mitochondrial biogenesis [BR:
shu03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
SHYC_04120 (groEL)
Exosome [BR:
shu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SHYC_04120 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
SHYC_04120 (groEL)
Exosomal proteins of breast cancer cells
SHYC_04120 (groEL)
Exosomal proteins of colorectal cancer cells
SHYC_04120 (groEL)
Exosomal proteins of bladder cancer cells
SHYC_04120 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AJC95613
UniProt:
A0A0A8HN96
LinkDB
All DBs
Position
880961..882580
Genome browser
AA seq
539 aa
AA seq
DB search
MAKELKFSEDARQSMLRGVDKLANAVKVTIGPKGRNVVLDKEFTAPLITNDGVTIAKEIE
LEDPYENMGAKLVQEVANKTNEIAGDGTTTATVLAQAMIQEGLKNVTSGANPVGIRQGID
KAVAVAIESLHNISQKVENKEEIAQVGSISAADEEVGRYISEAMEKVGNDGVISIEESSG
FNTELDVVEGMQFDRGYQSPYMVTDSDKMTAELEKPYILITDKKISSFQDILPLLEQIVQ
SNRPILIVADEVEGDALTNLVLNRMRGTFTAVAVKAPGFGDRRKAMLEDLAILTGAQVIT
DDLGLELKEATIDMLGTASKVEVTKDNTTVVDGDGDPTNIDARVNQLKAQIDETDSDFDR
EKLQERLAKLAGGVAVIKVGAASETELKERKLRIEDALNSTRAAVEEGIVAGGGTALMNV
YQNVSDIEAEGDEATGINIVLKALQAPVRQIAENAGLEGSVIVERMKNADPGVGFNAATN
EWVNMLEAGIVDPTKVTRSALQHAASVAAMFLTTEAVVANIPEEKGNDAPQMGGMPGMM
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagaattaaagttttcagaagatgcacgtcaatcaatgttacgtggcgttgac
aaacttgcgaatgcagttaaagtaaccattggtcctaaagggcgaaatgtagttttagat
aaagaatttactgcgccattaattacaaacgatggtgtaactattgctaaagaaatcgaa
ttagaagatccttatgaaaatatgggggcgaaacttgttcaagaagtcgcaaacaaaacg
aatgaaattgctggtgatggtacgacaactgcgacagtccttgcacaagccatgattcaa
gaaggccttaaaaacgttacaagtggtgcaaatccagttggcattcgtcaaggaattgat
aaagcggtagctgttgcaatagaatcgttacacaatatttctcaaaaagtagaaaataaa
gaagaaattgcacaagttggatcaatttcagcagcagatgaagaagtaggtcgttatatt
tctgaagctatggaaaaagtaggaaatgatggtgttatttctattgaagagtctagcgga
tttaataccgaattagatgttgtagaaggaatgcagtttgatcgtggctatcaatctccg
tatatggttactgattctgacaaaatgacagcggaattagaaaaaccatatattttaatt
acggataagaaaatttcttcgttccaagatattttacctttacttgagcaaattgttcaa
tcgaatcgaccaattcttattgttgcagacgaagtagagggtgacgcattaacaaactta
gtattaaaccgtatgcgtggtacatttacagctgttgcagtgaaagcccctggatttggt
gatcgtcgtaaagcgatgttagaagatttagccattctaactggtgctcaagtcattaca
gatgatttaggtcttgaactaaaagaagccacaattgatatgttaggtactgcaagtaaa
gtagaagtgacgaaggataacacaacagttgttgatggagacggtgatccaacaaatatt
gatgcgcgtgtaaatcaattaaaagcgcaaatcgatgaaacggattctgactttgaccgt
gaaaagctacaagaacgcctagctaaacttgctggcggtgtggcggtaattaaagttggc
gcggcatcagaaacagaacttaaagaacgtaaattacgaattgaggatgcattgaactcg
acgcgtgctgcagttgaagaaggtatcgttgcaggtggtggtaccgctttaatgaatgta
taccaaaatgtgagtgatatcgaagcggaaggtgatgaagcaacaggtattaatatcgtc
ttgaaagcacttcaggcaccagtacgtcaaattgcagaaaatgctggattagaaggttct
gttattgttgaacgcatgaaaaatgcagatccaggtgttggattcaatgcggctactaat
gaatgggtaaacatgttagaagcaggcattgtagatccaacgaaagtaacgcgttctgca
ttacaacatgcagcaagtgttgcagctatgttcttaacaactgaagctgttgttgctaat
attcctgaagaaaaaggcaatgatgcacctcaaatgggtggcatgccgggtatgatgtaa
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