Staphylococcus hyicus: SHYC_04295
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Entry
SHYC_04295 CDS
T03578
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
shu
Staphylococcus hyicus
Pathway
shu03420
Nucleotide excision repair
shu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
shu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SHYC_04295 (pcrA)
03430 Mismatch repair
SHYC_04295 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shu03400
]
SHYC_04295 (pcrA)
Enzymes [BR:
shu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SHYC_04295 (pcrA)
DNA repair and recombination proteins [BR:
shu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SHYC_04295 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
SHYC_04295 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
AJC95648
LinkDB
All DBs
Position
912563..914752
Genome browser
AA seq
729 aa
AA seq
DB search
MNPLVKHMNTEQSEAVRTTEGPLLIMAGAGSGKTRVLTHRIAYLLDEKGVSPYNILAITF
TNKAAKEMKERVQKLVGEEAEVIWMSTFHSMCVRILRRDADRIGIERNFTIIDPTDQKSV
IKDVLKRENIDPKRYEPRMFISAISNLKNELKTPQDALESANDFYTQMVAKVYEGYQKQL
IRNQALDFDDLIMTTIKLFERVPDVLDYYQNKFQYIHVDEYQDTNKAQYTLVNLIAQKFK
NLCVVGDSDQSIYGWRGADIQNILSFEEDYPNARTIFLEQNYRSTKTILNAANEVIRNNT
ERKPKGLWTANANGEKIKYYEAFSERDESEYVVREIFKQQKKGRKLKDIAVLYRTNAQSR
VLEETFLKSNVPYVMVGGQKFYDRKEIKDVLSYLRLIANSADDISLRRVINIPKRGIGPS
SVDKIAAYATSNSISMFEALAEVDFIGLSKKVTQAASEFYQLINHLMQEQEFLEISEIVE
EVLIKSGYRDMLEREQTLEARSRLENIDEFMSVPKDYEKNTPLEEQSLINFLTDLSLVAD
VDEANLEDGVTLMTMHSAKGLEYPVVFIIGMEESIFPHLRAIKSDDDHEMEEERRISYVA
ITRAEEELYLTHASSRTLFGRSQSNPRSRFLNEIPDDLLALPERKQTTQIGQKRTAPKRG
YSQRTVVNNAKPSTSEWNVGDKVTHKSWGEGMVSNVNVKNGSVELDIIFKSQGPKRLLAQ
FAPIEKKED
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgaatccacttgtaaagcatatgaatacagaacaaagtgaagcggtacgcacgactgaa
ggaccgcttttaattatggcgggtgctggatctggaaaaacgcgtgtattaacgcatcgt
attgcatacttgcttgatgaaaaaggtgtatctccttataacattttagcgataaccttt
acaaataaggctgcgaaagagatgaaagaacgtgttcaaaaactagtaggtgaagaagca
gaagtgatttggatgtcaacctttcattcaatgtgcgttcgtattcttcgtcgtgatgcc
gatcgcataggcatcgaacggaactttaccataatagacccaactgaccaaaaatcagtc
attaaagatgttttaaaacgtgaaaatatagatccaaaacgttatgaaccgcgcatgttt
atcagcgccattagcaatttaaaaaatgaattaaaaacaccgcaagatgcattggaatcg
gcaaatgacttttatacacaaatggtcgctaaagtatatgaaggatatcaaaaacagctc
attcgtaaccaagcattagattttgatgacttaatcatgacaacgattaagctttttgaa
cgtgtccctgatgtattagattactatcaaaataaatttcaatacatacatgttgacgag
tatcaagatactaacaaagcgcaatatacgcttgtaaatttaatagcacaaaagttcaaa
aatttatgtgttgtgggtgattcggatcaatctatttatggttggcgtggcgcggatatt
caaaacatattatcttttgaagaagactatcctaatgcaagaacaatttttctcgaacaa
aattatcgttcaacaaaaacgatattaaatgctgcgaatgaagtaatcagaaacaatact
gagagaaaacctaaagggctatggacggcaaatgccaacggagaaaaaattaaatattac
gaagcgtttagcgaacgagatgaatctgaatatgtggttcgagaaatatttaaacagcaa
aaaaagggacgtaaattgaaagatatcgcagtgttgtatcgtaccaatgcgcagtcacgt
gtacttgaagagacgtttttaaaatcgaatgtgccttatgtcatggtaggtggacaaaag
ttctacgaccgaaaagagattaaagatgtgttgagttatttacgtttgattgctaatagt
gcagatgatattagtttacgccgagtgattaatatccctaaaagaggtattggtccgtca
tccgtcgataaaattgctgcctatgcaacatcaaatagtatcagtatgtttgaagcttta
gctgaggtcgactttattggattatccaaaaaagtgacacaagctgcatctgaattttat
caattaatcaatcatttaatgcaggaacaagaatttttagaaataagtgaaattgttgaa
gaagtgttaattaagtctggttatcgtgacatgttagagcgtgaacaaacattagaagca
cgtagccgattagagaatatagatgaatttatgtctgtaccgaaagattacgaaaaaaat
acgccattagaagaacaatcactcattaactttttaacggatttatctctcgttgccgat
gttgatgaagctaacttagaagatggtgttacgttaatgacaatgcattctgctaaaggt
ttggaatatccagttgtatttataataggtatggaagaatcgattttcccgcatcttaga
gctataaagagtgatgatgatcatgaaatggaagaagagcgtcgtattagttatgtggcg
attactcgagcagaagaagaactatatttaacacatgcctcatcgcgtacattattcgga
cgttcgcaatcaaatccacgttcacgttttctaaacgaaattcccgatgatttattagca
ttgccagaacgaaaacagacaacgcaaataggacagaaacgcacagcgcctaaaagaggg
tacagtcaacgtacggtggtaaacaacgctaaaccatctacatccgaatggaatgtagga
gataaagtgacgcataaaagttggggagagggtatggtatcaaatgtgaacgttaaaaat
gggtctgttgagttagatattatattcaaatcacaaggacctaagcgactattggcgcaa
tttgctccgattgagaaaaaggaggactaa
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