Staphylococcus hyicus: SHYC_06760
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Entry
SHYC_06760 CDS
T03578
Name
(GenBank) DEAD/DEAH box RNA helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
shu
Staphylococcus hyicus
Brite
KEGG Orthology (KO) [BR:
shu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shu03019
]
SHYC_06760
03009 Ribosome biogenesis [BR:
shu03009
]
SHYC_06760
Enzymes [BR:
shu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SHYC_06760
Messenger RNA biogenesis [BR:
shu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SHYC_06760
Ribosome biogenesis [BR:
shu03009
]
Prokaryotic type
rRNA helicases
SHYC_06760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
AJC96093
LinkDB
All DBs
Position
1376044..1377384
Genome browser
AA seq
446 aa
AA seq
DB search
MPKHPFGHFNFDPSLIAAIDELNFKQPTDVQQRVIPRLLKRVNLIGQSQTGTGKSHSFLL
PIFQLLDAEIHEPQAVILAPTRELATQLYHAALQLAEHKKGIKVSLFIGGTDFEKDKQKT
TQQPQLVIGTPTRINDLAKANALHVHLAQQLIIDEADLMIDLGLIQEVDHIASRLDKEAK
MAVFSATIPKSLHPFLNKYLQNPEFVEVKTEHKNKKNITFYLIPTRGTEKLDKTVELIDT
INPYLGIIFCNSRDNANDLAEKLNQKGIQVGMIHGGLSPRERKQQMKRIRNLDFQYVIAS
DLASRGIDIEGVSHVINYDVPLDIDFFTHRVGRTGRGNYKGIAITLYKPDEEYLIQQIEQ
KGYHFENVDIKDGELRPIKAHNTRRLRQKQDDHITQQVKNKVKRNNKKKVKPGYKKKFKQ
EVENLKRQEKRQHSRRKKRLDRKNKK
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgcctaagcacccatttggtcatttcaattttgacccaagtttaattgcagctatagac
gaattaaactttaaacaaccgacagacgttcaacaacgtgtcattcctagattattaaaa
cgtgtcaacttaatcgggcaatcacaaactggaacaggtaagtctcattcatttttatta
ccgatcttccaattattagatgctgagatacatgaaccacaagcagtaattttagcacca
acaagagagttagctactcagctttatcatgctgcgctacagctagcagaacataaaaag
gggattaaagtaagcctatttatcgggggaaccgattttgaaaaggataaacaaaaaaca
acacaacaaccacaacttgttataggaaccccaacacgcataaatgatttagctaaagca
aatgctttacatgtgcacttggcacaacaattaattatagatgaagcagatttaatgatt
gatttaggattaattcaagaagtggatcacattgcttctcgtttagacaaagaggctaaa
atggctgtattcagcgcaacaataccaaaatcattacatccattcttaaataagtatctt
caaaatccagaatttgttgaagttaaaactgaacacaaaaacaaaaaaaatattacattt
tacttaattcctactcgtggtactgaaaaattagataaaacagttgaattaatagatacg
attaatccatatttaggcatcattttctgtaatagtcgagataatgcaaatgatttggca
gagaaattgaatcaaaaagggattcaagttggcatgattcatggtggattatctccgcgt
gaacgtaaacaacaaatgaaacgtatccgtaatttagactttcaatatgtgattgcaagt
gatctcgcttcacgtggaattgatattgaaggtgtcagtcacgttattaattatgatgtg
ccattagatatagatttctttacacatcgtgtaggtcgtacaggtagagggaattataaa
ggcattgcgattacactttataaaccagatgaagagtacctcatccaacaaatcgaacaa
aaaggttatcattttgaaaatgtagatattaaggatggtgagttgcgcccaataaaagca
cacaatacacgtcgcttaagacaaaaacaagatgaccatattactcaacaagtgaaaaac
aaagtaaaacgtaataataagaaaaaagttaagccaggttataaaaagaaatttaaacaa
gaagttgaaaatttaaaacgccaagaaaaaagacaacatagtagacgtaaaaaacgtctt
gatcgtaaaaataaaaaataa
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