Staphylococcus hyicus: SHYC_07000
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Entry
SHYC_07000 CDS
T03578
Symbol
lpd
Name
(GenBank) dihydrolipoamide dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
shu
Staphylococcus hyicus
Pathway
shu00010
Glycolysis / Gluconeogenesis
shu00020
Citrate cycle (TCA cycle)
shu00260
Glycine, serine and threonine metabolism
shu00280
Valine, leucine and isoleucine degradation
shu00310
Lysine degradation
shu00380
Tryptophan metabolism
shu00620
Pyruvate metabolism
shu00630
Glyoxylate and dicarboxylate metabolism
shu00640
Propanoate metabolism
shu00670
One carbon pool by folate
shu00785
Lipoic acid metabolism
shu01100
Metabolic pathways
shu01110
Biosynthesis of secondary metabolites
shu01120
Microbial metabolism in diverse environments
shu01200
Carbon metabolism
shu01210
2-Oxocarboxylic acid metabolism
shu01240
Biosynthesis of cofactors
Module
shu_M00009
Citrate cycle (TCA cycle, Krebs cycle)
shu_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
shu_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
shu_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
shu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
SHYC_07000 (lpd)
00020 Citrate cycle (TCA cycle)
SHYC_07000 (lpd)
00620 Pyruvate metabolism
SHYC_07000 (lpd)
00630 Glyoxylate and dicarboxylate metabolism
SHYC_07000 (lpd)
00640 Propanoate metabolism
SHYC_07000 (lpd)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SHYC_07000 (lpd)
00280 Valine, leucine and isoleucine degradation
SHYC_07000 (lpd)
00310 Lysine degradation
SHYC_07000 (lpd)
00380 Tryptophan metabolism
SHYC_07000 (lpd)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
SHYC_07000 (lpd)
00670 One carbon pool by folate
SHYC_07000 (lpd)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
shu04147
]
SHYC_07000 (lpd)
Enzymes [BR:
shu01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
SHYC_07000 (lpd)
Exosome [BR:
shu04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
SHYC_07000 (lpd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
DAO
NAD_binding_8
Pyr_redox_3
HI0933_like
AlaDh_PNT_C
FAD_oxidored
GIDA
FAD_binding_2
3HCDH_N
FAD_binding_3
Trp_halogenase
2-Hacid_dh_C
Lycopene_cycl
XdhC_C
UDPG_MGDP_dh_N
NAD_Gly3P_dh_N
TrkA_N
NAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
AJC96142
LinkDB
All DBs
Position
1418096..1419514
Genome browser
AA seq
472 aa
AA seq
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MTKEKYDLVVLGGGIAGYSAAIRASQLGKSVALVEKDKVGGTCLHRGCIPTKSFLKSAEV
YQYIQNADHFGLTVEGAAVNFKGILERKSRIVETMYRGIQHLVKQNKIDLFHGTGRLLGA
SIFTPQSGTVSVEYENGESELLPNDYVLIATGSKPIELPMLPFDHNVILSSNDMMEIAEL
PKRMAIIGGGVIGLEFASLLNTFGVEVTIIEAAQRILINESETLSRQMKQQLSKQGITIL
ENTAVTEDIVTITDHNVTFDLEDTLTVDKVLVAVGRQAITDDLGLNNTKVILTDKKTIET
NTFMQTADQHIYAAGDVIGQLQLAHVAAKEGVIAVEHMFNENPVGIDYDHMPRCIYTHPE
VASIGLTAEAAKNQGFETKIVKAPFKANGKALIVSQHNPDGFAELVFDKEIRTFLGAALI
GPNVTELINELSLLSFMDGSALELGNATHAHPSISELLMELGLKAENQSIHI
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaagaaaaatatgatttagtcgttttaggtggcggtattgcgggttattctgct
gctattcgtgccagtcaactcggcaaatccgttgctttagttgaaaaagataaagttggc
ggtacatgcttacaccgtggttgtatcccaacaaaatcatttttaaaatcagctgaagtc
tatcaatatattcaaaatgcagaccactttggcctaaccgttgaaggggcagcagtgaac
tttaaaggtattttagaacgtaaatcacgaattgttgaaacgatgtaccgaggcattcaa
caccttgtaaaacaaaataaaattgatttatttcacggtactggacgcctgttgggagca
tcaattttcacaccacaaagtgggacagtgtcagtagaatatgaaaatggtgagtctgaa
ctacttccaaatgattatgtgttgattgctaccggttctaaaccaattgagctaccgatg
cttccatttgatcacaacgtcattttaagtagtaacgatatgatggaaatagcagaatta
cctaaacgtatggcaattattggtggcggtgtcataggattagagtttgctagtctttta
aacacatttggtgtagaagttaccattattgaagcagctcaacgcattttaatcaatgaa
tcagagacgttgagtcgtcaaatgaaacaacagttgtctaaacaagggattacaatatta
gaaaacactgctgtcacagaagacattgtaacaattactgatcataatgtaacgtttgat
ttagaagatactttaaccgtagataaggtgctagtcgccgttggacgtcaagcgattact
gatgatttaggattaaacaacacaaaagtcattttaactgataaaaaaacaattgaaacc
aatacatttatgcaaaccgctgatcaacatatttacgcagctggagatgtaattggacaa
cttcaactggcacatgttgctgctaaagaaggcgtcattgctgtagaacatatgtttaat
gaaaacccagtgggcatagattacgaccacatgccacgttgtatatacacgcatcctgaa
gtggcttcaattgggttgacagcagaagcagcaaaaaatcaaggattcgaaacaaaaatc
gtaaaagcaccatttaaagctaatggaaaagcgttaattgtttcacaacacaatccagat
ggctttgctgaactcgtattcgataaagagatacgaacgtttttaggtgccgctctgata
ggtccgaacgttacagaacttattaatgagttatcgttacttagcttcatggacggatcc
gctttagaactcggaaatgcaacacatgcacatccgtcaatatctgaattattaatggaa
cttggtttgaaagctgaaaaccaatccattcacatctag
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