Staphylococcus hyicus: SHYC_07175
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Entry
SHYC_07175 CDS
T03578
Symbol
hup
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
shu
Staphylococcus hyicus
Brite
KEGG Orthology (KO) [BR:
shu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shu03032
]
SHYC_07175 (hup)
03036 Chromosome and associated proteins [BR:
shu03036
]
SHYC_07175 (hup)
03400 DNA repair and recombination proteins [BR:
shu03400
]
SHYC_07175 (hup)
DNA replication proteins [BR:
shu03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SHYC_07175 (hup)
Chromosome and associated proteins [BR:
shu03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
SHYC_07175 (hup)
DNA repair and recombination proteins [BR:
shu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
SHYC_07175 (hup)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
DUF2267
Glycos_trans_3N
Rpf1_C
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
AJC96176
UniProt:
A0A0A8HQ30
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All DBs
Position
1457492..1457764
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AA seq
90 aa
AA seq
DB search
MNKTDLINAVAEQADLTKKEAGQAVDAVFESIQKSLAKGDKVQLIGFGNFEVRERAARKG
RNPQTGKEIDIPASKVPAFKAGKALKDAVK
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaactgacttaatcaacgctgtagctgaacaagctgacttaacaaaaaaagaa
gctggtcaagctgttgatgccgttttcgaatcaattcaaaaatcactagcaaaaggtgac
aaagtacaattaatcggtttcggtaactttgaggtacgtgagcgtgcagctcgtaaagga
cgtaaccctcaaacaggtaaagaaattgatattcctgcaagtaaagttccagctttcaaa
gcaggtaaagctttaaaagatgcagtgaaataa
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