Staphylococcus hyicus: SHYC_08035
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Entry
SHYC_08035 CDS
T03578
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
shu
Staphylococcus hyicus
Brite
KEGG Orthology (KO) [BR:
shu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shu03016
]
SHYC_08035 (truB)
Enzymes [BR:
shu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SHYC_08035 (truB)
Transfer RNA biogenesis [BR:
shu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SHYC_08035 (truB)
Prokaryotic type
SHYC_08035 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AJC96345
LinkDB
All DBs
Position
complement(1647056..1647973)
Genome browser
AA seq
305 aa
AA seq
DB search
MYHGILPVYKARGLTSHDVVFKLRKILKTKKIGHTGTLDPEVDGVLPICIGQATKLSDYV
MDMGKTYIAEVTLGISTTTEDQTGEIIKQESIAAQSISEEQIDEVLASFQGVITQIPPMY
SSVKVNGRKLYEYARRGETIERPARQVEIMKIDRINQVVFDKECATFNIEVACGKGTYIR
TLATDIGKQLNVPAHMSRLTRIESGGFHIDQALSIESIAEKHQNDTLKDFILPMIYGLKA
LPMIYVDDEQLKQRISNGQKLLRQPLNIKIQNQCVFVDATSNAVLAIYEPHPSNHSEIKP
KKVFN
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgtatcatggtattttacctgtgtataaagcgcgtggattaacaagtcatgatgtagtt
tttaaactacgaaaaattttgaagacaaagaagattggccacacagggactttagatccc
gaagtagatggcgtactgccgatttgtattggtcaagctacaaaattaagtgactatgtg
atggatatggggaaaacttatatagcagaagttacattaggtatctcaacgactacagag
gatcaaacgggagaaataataaaacaggaaagcattgcggcacaatctatttccgaagaa
caaatagacgaagtgctggcttcttttcaaggcgtaatcacacaaatccccccaatgtac
tcttctgttaaagtgaatggtcgaaaattgtatgaatatgccagacgtggtgaaacaatt
gagcggccggcacgccaagtcgaaattatgaaaatagatcgaataaatcaagtggttttt
gataaagaatgtgctacatttaatatagaagtagcctgtggcaaaggtacgtatattcgg
actttagcaactgatattggaaagcagttaaatgtgcctgcacatatgtctcgtttaaca
cgtatagaaagtggtggttttcatatcgatcaagctttatcaattgaatcgatagcagaa
aaacatcaaaatgatacattgaaagattttattctacctatgatttatgggttgaaagct
ttacccatgatatatgtggatgacgaacaattaaaacaacgtatttctaatggtcaaaaa
ttgttacgccaaccattaaatataaaaattcaaaaccaatgtgtttttgttgatgcaaca
tcaaatgcagttttagccatttatgagccacatccgtcgaatcacagcgaaattaaaccg
aaaaaggtgtttaactaa
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