Staphylococcus hyicus: SHYC_08150
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Entry
SHYC_08150 CDS
T03578
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
shu
Staphylococcus hyicus
Brite
KEGG Orthology (KO) [BR:
shu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shu03032
]
SHYC_08150 (topA)
03400 DNA repair and recombination proteins [BR:
shu03400
]
SHYC_08150 (topA)
Enzymes [BR:
shu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SHYC_08150 (topA)
DNA replication proteins [BR:
shu03032
]
Prokaryotic type
DNA Topoisomerases
SHYC_08150 (topA)
DNA repair and recombination proteins [BR:
shu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SHYC_08150 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Toprim_2
Stap_Strp_tox_C
HypA
Zn_ribbon_RPB9
Motif
Other DBs
NCBI-ProteinID:
AJC96368
UniProt:
A0A0A8HQF9
LinkDB
All DBs
Position
complement(1672426..1674495)
Genome browser
AA seq
689 aa
AA seq
DB search
MADNLVIVESPAKAKTIEKYLGKKYKVVASMGHVRDLPRSQMGVDVEDNYEPKYITIRGK
GPVVKDLKRYAKKAKKVFLASDPDREGEAIAWHLAHILELEDSKENRVVFNEITKDAVKE
SFKNPRGIEMELVDAQQARRVLDRLVGYNISPVLWKKVKKGLSAGRVQSVALRLVIDREN
EIRNFKPEEYWSIEGEFRHKKSKFTAKFLHYKGKPFKLSTKDDVAVITKALDGNEFEVSN
VTKKEKTRRPANPFTTSTLQQEAARKLNFKARKTMMVAQQLYEGIDLKRKGTIGLITYMR
TDSTRISKDAQAEAKKYIQAEYGDAYLTKAVSKGKQGDQDAHEAIRPTSTMRTPNEMKPF
LTRDQYRLYKLIWERFVASQMAPAILDTVAVDLTQNDVKFRANGQTIKFKGFMTLYVEMQ
DDKEKDKENRLPELNVGDTALATKIDPAQHFTQPPPRYTEARLVKTLEELKIGRPSTYAP
TIDTIQKRNYVKSENKRFVPTELGEIVHEQVKDYFPEIIDVDFTVNMETLLDKIADGDIA
WKKVVSDFYNSFKQDVERAESEMEKIEIKDEPAGEDCEKCGSPMVIKMGRYGKFMACSNF
PDCRNTKAIVKPIGVTCPKCKKGDVVERKSKKNRVFYGCSGYPECDFVTWDKPVGRDCPK
CQHYLVESKKGRTSQVVCSNCDYKEEVQK
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
ttggcagataatcttgtcattgttgaatcgcctgcaaaagctaagacgatagaaaaatat
ttaggtaagaaatataaagtagttgcatcaatgggacatgtgcgtgatttgcctcgaagt
caaatgggtgttgatgtagaagataattacgaacctaaatatattaccatccgcggtaaa
gggccagtcgttaaagatttgaaaagatatgctaaaaaggcgaaaaaagtttttctagca
agtgaccccgatcgtgaaggtgaagcgattgcatggcatttagctcatattttagaatta
gaagacagtaaagaaaaccgtgttgtgtttaatgagattacaaaagatgcggtaaaagaa
agttttaaaaatcctagaggtattgaaatggaacttgtcgatgcgcaacaagcacgacgt
gtactagatcgattggtaggttataatatttctccagtactatggaagaaagtaaaaaaa
ggtttatcagcaggtcgtgtacaatccgttgcgttaaggttagtcatcgaccgagaaaat
gaaattcgcaattttaaacctgaagaatattggtcaattgaaggtgaatttagacataaa
aaatccaaatttacagccaagtttcttcattataaaggaaaaccgtttaagctatcgacg
aaagatgacgtcgctgtcattacgaaagcgttagatggtaatgaatttgaagtttcgaat
gtgactaaaaaagaaaaaacacgtcgtccggcaaatccttttacaacttcaacgttacaa
caagaagcagcacgtaaattgaattttaaagcacgtaaaacgatgatggttgcgcaacaa
ttgtacgaaggtattgatttaaaacgtaaaggtacgattggtttaattacgtatatgcgt
acggattcgacacgtatttctaaagatgcgcaagctgaagctaaaaaatatattcaagcg
gaatatggtgatgcttatttaacaaaagcggtgtctaaaggaaaacaaggtgatcaagat
gcgcatgaagcgatacgtcctacaagcactatgcgtacaccaaatgaaatgaaaccattt
cttacacgtgaccaatatcgcttgtataaattgatttgggaacgtttcgtggcaagtcaa
atggcacctgcgattttggatacagtcgctgtagatttaactcaaaacgatgtgaaattt
agagcaaatggccaaacgattaaatttaaaggttttatgacgctttatgtcgaaatgcaa
gatgacaaagaaaaagataaagaaaatcgtttgcctgaactaaacgtaggagacacagct
ttagcgactaaaattgatccggcacaacattttacgcaaccaccaccacgatatacagaa
gcacgccttgttaaaactttagaagaacttaaaattggccgtccatcaacatatgcaccg
acgattgatacaattcaaaaacgtaattatgttaagagtgaaaataaacgtttcgtgcca
actgaattaggtgaaattgtgcatgaacaagtgaaagactatttccctgaaattatagat
gttgatttcaccgtaaatatggaaacgttgctggataaaattgctgatggggatatcgca
tggaaaaaagtagtgagtgatttttacaatagttttaagcaagatgtagagcgtgctgaa
tctgagatggagaaaatcgaaattaaagatgaaccagcgggcgaagattgtgaaaaatgt
ggcagtccgatggtgattaaaatggggcgttatggtaaattcatggcatgctctaacttc
ccggattgtcgtaatactaaagcaattgtaaaaccaattggcgtcacatgtccaaaatgt
aaaaaaggtgacgttgtcgaacgtaaatcgaagaagaatcgtgtgttttacggatgtagt
ggttatcctgagtgtgattttgttacgtgggataaacctgttggccgtgattgtccaaaa
tgtcagcattatttagttgagtctaaaaaaggacgcacatcgcaagtggtatgttcaaat
tgtgattataaagaagaagttcaaaaataa
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