Staphylococcus hyicus: SHYC_08830
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Entry
SHYC_08830 CDS
T03578
Symbol
pdhD
Name
(GenBank) dihydrolipoamide dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
shu
Staphylococcus hyicus
Pathway
shu00010
Glycolysis / Gluconeogenesis
shu00020
Citrate cycle (TCA cycle)
shu00260
Glycine, serine and threonine metabolism
shu00280
Valine, leucine and isoleucine degradation
shu00310
Lysine degradation
shu00380
Tryptophan metabolism
shu00620
Pyruvate metabolism
shu00630
Glyoxylate and dicarboxylate metabolism
shu00640
Propanoate metabolism
shu00785
Lipoic acid metabolism
shu01100
Metabolic pathways
shu01110
Biosynthesis of secondary metabolites
shu01120
Microbial metabolism in diverse environments
shu01200
Carbon metabolism
shu01210
2-Oxocarboxylic acid metabolism
shu01240
Biosynthesis of cofactors
Module
shu_M00009
Citrate cycle (TCA cycle, Krebs cycle)
shu_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
shu_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
shu_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
shu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
SHYC_08830 (pdhD)
00020 Citrate cycle (TCA cycle)
SHYC_08830 (pdhD)
00620 Pyruvate metabolism
SHYC_08830 (pdhD)
00630 Glyoxylate and dicarboxylate metabolism
SHYC_08830 (pdhD)
00640 Propanoate metabolism
SHYC_08830 (pdhD)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SHYC_08830 (pdhD)
00280 Valine, leucine and isoleucine degradation
SHYC_08830 (pdhD)
00310 Lysine degradation
SHYC_08830 (pdhD)
00380 Tryptophan metabolism
SHYC_08830 (pdhD)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
SHYC_08830 (pdhD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
shu04147
]
SHYC_08830 (pdhD)
Enzymes [BR:
shu01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
SHYC_08830 (pdhD)
Exosome [BR:
shu04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
SHYC_08830 (pdhD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
GIDA
Pyr_redox_3
NAD_binding_8
FAD_oxidored
FAD_binding_2
HI0933_like
FAD_binding_3
AlaDh_PNT_C
3HCDH_N
DAO
UDPG_MGDP_dh_N
Thi4
Motif
Other DBs
NCBI-ProteinID:
AJC96501
UniProt:
A0A846SCW5
LinkDB
All DBs
Position
complement(1816709..1818115)
Genome browser
AA seq
468 aa
AA seq
DB search
MVVGDFPIETDTIVIGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALLN
VSHRFEQAQHGADLGVTAENVSLDFDKVQSFKGSVVNKLTSGVEALLKGNKVEIVKGEAY
FVDKNSLRVMDDKSAQTYNFKNAIIATGSRPIEIPNFKFGGRILDSTGALNLKEVPKKLV
VVGGGYIGSELGTAYANFGTEVTILEGAKDILGGFEKQMTQPVKKGMKAKGMTIETEALA
KSAEETDNGVKVTYEVKGEEKTIEADYVLVTVGRRPNTDELGLEEVGVKLTDRGLIDVDK
QSRTSVDSIYAIGDIVPGLPLAHKASYEAKIAAEAIAGHNSEVDYIGMPAVCFTEPELAQ
VGYTEAQAKEEGIEYKASKFPYQANGRALSLDDTTGFVKLITLKEDDTLIGAQVVGTSAS
DVIAELGLAIEAGMNAEDIALTVHAHPTLGEMSMEAAEKAIGLPIHTM
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggtagtcggagattttccaattgaaacagatactattgttatcggtgcaggtccaggt
ggatatgtagcagcaattcgcgcagcacaacttggtcaaaaagttacaatcgttgaaaaa
ggtaatttaggcggcgtttgtttaaacgttggttgtattccttcaaaagcattattaaac
gtatcacaccgttttgaacaagcacaacatggtgctgaccttggtgtgactgctgaaaac
gtttctttagatttcgataaagtacaatcttttaaaggttctgtcgttaataaattaacg
agcggtgttgaagctttattaaaaggtaacaaagtagaaatcgttaaaggtgaagcttat
ttcgtagacaaaaatagcttacgtgtaatggacgataaaagtgcgcaaacgtacaacttc
aaaaatgcaattattgctactggttctcgtccaattgaaatccctaatttcaaatttggt
ggtcgcatcttagattctacaggtgcattaaaccttaaagaagtacctaaaaaattagtt
gtcgttggtggcggttatatcggttcagaacttggtactgcgtatgcaaactttggtaca
gaagttactatccttgaaggtgcgaaagacatcttaggcggtttcgaaaaacaaatgaca
caacctgttaaaaaaggtatgaaagctaaaggtatgacgattgaaacggaagctttagca
aaatctgctgaagaaacagacaatggtgttaaagtaacgtatgaagttaaaggtgaagaa
aaaacaatcgaagcggattacgtattagtgactgtaggtcgccgtcctaacactgatgaa
ttaggtttagaagaagttggcgttaaattaacagatcgtggtttaattgatgttgataag
caaagccgcacttcagtagatagtatctatgcaattggtgatatcgttccaggtttacct
cttgcacataaagcaagctacgaagctaaaattgctgcagaagcaattgcaggccacaac
tctgaagtggattacatcggtatgccagcggtatgtttcactgaaccagaacttgctcaa
gttggttacactgaagcacaagcgaaagaagaaggtattgaatataaagcttctaaattc
ccttaccaagcaaacggtcgtgcattatcattagacgatacaactggtttcgttaagtta
attacacttaaagaagatgacactctaattggtgctcaagttgttggtactagtgcgtct
gacgtgattgctgagttaggtttagcaattgaagcaggtatgaacgctgaagatattgct
ttaacagtacatgcgcacccgacattaggtgaaatgagcatggaagctgctgaaaaagca
atcggtttaccaattcatacaatgtaa
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