KEGG   Staphylococcus hyicus: SHYC_08830
Entry
SHYC_08830        CDS       T03578                                 
Symbol
pdhD
Name
(GenBank) dihydrolipoamide dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
shu  Staphylococcus hyicus
Pathway
shu00010  Glycolysis / Gluconeogenesis
shu00020  Citrate cycle (TCA cycle)
shu00260  Glycine, serine and threonine metabolism
shu00280  Valine, leucine and isoleucine degradation
shu00310  Lysine degradation
shu00380  Tryptophan metabolism
shu00620  Pyruvate metabolism
shu00630  Glyoxylate and dicarboxylate metabolism
shu00640  Propanoate metabolism
shu00785  Lipoic acid metabolism
shu01100  Metabolic pathways
shu01110  Biosynthesis of secondary metabolites
shu01120  Microbial metabolism in diverse environments
shu01200  Carbon metabolism
shu01210  2-Oxocarboxylic acid metabolism
shu01240  Biosynthesis of cofactors
Module
shu_M00009  Citrate cycle (TCA cycle, Krebs cycle)
shu_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
shu_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
shu_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:shu00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    SHYC_08830 (pdhD)
   00020 Citrate cycle (TCA cycle)
    SHYC_08830 (pdhD)
   00620 Pyruvate metabolism
    SHYC_08830 (pdhD)
   00630 Glyoxylate and dicarboxylate metabolism
    SHYC_08830 (pdhD)
   00640 Propanoate metabolism
    SHYC_08830 (pdhD)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    SHYC_08830 (pdhD)
   00280 Valine, leucine and isoleucine degradation
    SHYC_08830 (pdhD)
   00310 Lysine degradation
    SHYC_08830 (pdhD)
   00380 Tryptophan metabolism
    SHYC_08830 (pdhD)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    SHYC_08830 (pdhD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:shu04147]
    SHYC_08830 (pdhD)
Enzymes [BR:shu01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     SHYC_08830 (pdhD)
Exosome [BR:shu04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   SHYC_08830 (pdhD)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox GIDA Pyr_redox_3 NAD_binding_8 FAD_oxidored FAD_binding_2 HI0933_like FAD_binding_3 AlaDh_PNT_C 3HCDH_N DAO UDPG_MGDP_dh_N Thi4
Other DBs
NCBI-ProteinID: AJC96501
UniProt: A0A846SCW5
LinkDB
Position
complement(1816709..1818115)
AA seq 468 aa
MVVGDFPIETDTIVIGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALLN
VSHRFEQAQHGADLGVTAENVSLDFDKVQSFKGSVVNKLTSGVEALLKGNKVEIVKGEAY
FVDKNSLRVMDDKSAQTYNFKNAIIATGSRPIEIPNFKFGGRILDSTGALNLKEVPKKLV
VVGGGYIGSELGTAYANFGTEVTILEGAKDILGGFEKQMTQPVKKGMKAKGMTIETEALA
KSAEETDNGVKVTYEVKGEEKTIEADYVLVTVGRRPNTDELGLEEVGVKLTDRGLIDVDK
QSRTSVDSIYAIGDIVPGLPLAHKASYEAKIAAEAIAGHNSEVDYIGMPAVCFTEPELAQ
VGYTEAQAKEEGIEYKASKFPYQANGRALSLDDTTGFVKLITLKEDDTLIGAQVVGTSAS
DVIAELGLAIEAGMNAEDIALTVHAHPTLGEMSMEAAEKAIGLPIHTM
NT seq 1407 nt   +upstreamnt  +downstreamnt
atggtagtcggagattttccaattgaaacagatactattgttatcggtgcaggtccaggt
ggatatgtagcagcaattcgcgcagcacaacttggtcaaaaagttacaatcgttgaaaaa
ggtaatttaggcggcgtttgtttaaacgttggttgtattccttcaaaagcattattaaac
gtatcacaccgttttgaacaagcacaacatggtgctgaccttggtgtgactgctgaaaac
gtttctttagatttcgataaagtacaatcttttaaaggttctgtcgttaataaattaacg
agcggtgttgaagctttattaaaaggtaacaaagtagaaatcgttaaaggtgaagcttat
ttcgtagacaaaaatagcttacgtgtaatggacgataaaagtgcgcaaacgtacaacttc
aaaaatgcaattattgctactggttctcgtccaattgaaatccctaatttcaaatttggt
ggtcgcatcttagattctacaggtgcattaaaccttaaagaagtacctaaaaaattagtt
gtcgttggtggcggttatatcggttcagaacttggtactgcgtatgcaaactttggtaca
gaagttactatccttgaaggtgcgaaagacatcttaggcggtttcgaaaaacaaatgaca
caacctgttaaaaaaggtatgaaagctaaaggtatgacgattgaaacggaagctttagca
aaatctgctgaagaaacagacaatggtgttaaagtaacgtatgaagttaaaggtgaagaa
aaaacaatcgaagcggattacgtattagtgactgtaggtcgccgtcctaacactgatgaa
ttaggtttagaagaagttggcgttaaattaacagatcgtggtttaattgatgttgataag
caaagccgcacttcagtagatagtatctatgcaattggtgatatcgttccaggtttacct
cttgcacataaagcaagctacgaagctaaaattgctgcagaagcaattgcaggccacaac
tctgaagtggattacatcggtatgccagcggtatgtttcactgaaccagaacttgctcaa
gttggttacactgaagcacaagcgaaagaagaaggtattgaatataaagcttctaaattc
ccttaccaagcaaacggtcgtgcattatcattagacgatacaactggtttcgttaagtta
attacacttaaagaagatgacactctaattggtgctcaagttgttggtactagtgcgtct
gacgtgattgctgagttaggtttagcaattgaagcaggtatgaacgctgaagatattgct
ttaacagtacatgcgcacccgacattaggtgaaatgagcatggaagctgctgaaaaagca
atcggtttaccaattcatacaatgtaa

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