Staphylococcus hyicus: SHYC_09440
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Entry
SHYC_09440 CDS
T03578
Symbol
addA
Name
(GenBank) ATP-dependent helicase/nuclease subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
shu
Staphylococcus hyicus
Brite
KEGG Orthology (KO) [BR:
shu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shu03400
]
SHYC_09440 (addA)
Enzymes [BR:
shu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SHYC_09440 (addA)
DNA repair and recombination proteins [BR:
shu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
SHYC_09440 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
ResIII
AAA_12
DUF3799
DUF5413
Motif
Other DBs
NCBI-ProteinID:
AJC96619
LinkDB
All DBs
Position
complement(1948776..1952414)
Genome browser
AA seq
1212 aa
AA seq
DB search
MTIPEKPNEVQWTDAQWESIYAKGKDILVAAAAGSGKTAVLVERIIQRILRDGIDVDRLL
VVTFTNLSAREMKHRIEARIHQAALEDPSNQHIKNQMAKIHQAQISTLHSFCLKLIQQHY
DILNIDPNFRTASEVENVLLLESVIDEVFEAHYAQLDPHFIDLTEQVGSDRNDERLRQII
KSLYYFSVANPEPEKWLNQLDAPYVERHMQNHYLNIINQYILLYLKAAHDAIEQAYAHLE
LLGELDKHIVFIDNHRRALQHLLSESQINKKKIQTYEFGRMPTKPKDIGKDEMLNDMYET
FKAYFDQFKTFMSKVKDELAARDDNALISELAHLAPRVRYLSQLTQDVIVTFNKAKRERN
LLDFTDYEHFALKILYDDNGRPSNIANVYRDKYEEILVDEYQDTNRVQEQIISSFKRGSA
SNGNLFMVGDVKQSIYKFRQADPSLFIEKYEAFNQTDHSGWRIDLSQNFRSRKEILNTTN
YLFHHMMDREIGEIEYDAAARLYYGAPFDDVSVPLHLNVLLEDESSELTGSEQEAHLIAT
QVDTIINTKKVYDVKTKLYRPATYKDIVILERSYSNARHLQHVFKDRDIPLYVNSKQGYF
EQTEIRLMLSFLRVIDNPLQDIYLVGLMRSVIYQFTEDELAEIRVVSPHDDYFYQSIQHY
MNAETAQRDLVDKLSRFLNDLSNYRIYSQSHPVYQLIDKIYNDHYLIQYFSGLVGGKGRR
ANLHGLFNKAVDFEQSSFRGLFQFIRFIDQMIERGKDFGEENVIGPNDNVVRMMTIHSSK
GLEFPFVIYSGLTRDFNMTDLNQPVILNQYEGIGLQYYDEMHGIFYPSLISMSIELVNRK
EIISEEMRLIYVALTRAKEQLFLIGREKKESKLYALTEAPIAHDKLTPLYRFNARNPFEL
IYSILSKYKHSSLVDALRFKDEQEKEMALTPSITIHHIQASDILPQSHHEDTRLSIEMLD
AETTHAVQNEMLIKEIENRLLFKYPHEQDQYLASKQSVSELKRQLDTEQSDTNYDRVRQY
RLGVATYQRPAFLESQKRTATEVGTLMHTVMQHLPFNEARLSDEALHEYITSLVTRAIIP
EDAVKDIRLEDVKRFIQSELYMEIAQSDAFYRELPFIVNQHDMESGEHDTDAAIIQGMID
VVFVKNGKYYFVDYKTDAFVRRRGMSDEAVGEQLKAKYRIQMNYYQKALETITGHNVSGY
LYFFKYGALAID
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atgacaatacctgaaaaacccaatgaagtacaatggacggatgcgcaatgggagagtata
tatgcaaaagggaaagatatacttgtagctgcagcagctgggtcaggtaaaacggcagtc
ttagtagaacgcattattcaacgtatccttagagatggtatcgacgtagaccggttactc
gttgtgacatttacaaatttaagtgcgcgtgaaatgaagcatcgaattgaagcgcgaatt
catcaagcagcacttgaagacccttcgaatcaacatattaaaaaccaaatggcgaaaata
catcaagcgcaaatttcaaccttgcacagtttttgtttaaaattgattcaacaacattat
gatattttaaatattgatccaaatttccgaacggcaagtgaagttgaaaatgtgctactt
ttagaatcggttattgatgaggtttttgaagcacattatgcgcaattagaccctcatttt
atagatttaacagaacaagtaggctcggatcgtaatgatgaacgcctcagacaaatcatc
aaaagtttgtattactttagtgttgctaatcctgaaccagaaaagtggttgaatcaacta
gatgcgccttatgttgaacgccatatgcaaaaccattaccttaacattattaatcaatat
attttgctttatttaaaggcagcacacgatgcaatcgaacaagcctatgcgcatttggaa
ttgttaggtgagttggacaagcacattgtttttatagataatcatcgtcgtgcgttgcaa
catcttctatctgaatctcaaataaataaaaagaaaattcaaacgtatgaatttgggcgc
atgcctacgaaaccgaaagatattggtaaggatgagatgttaaatgacatgtatgagaca
tttaaagcttattttgatcaatttaaaacattcatgtcgaaagtcaaagatgaacttgcg
gcacgagatgataatgcacttatatctgaacttgcacacttggcgcctcgtgttcgttat
ttaagtcaattaacgcaagatgttattgtaacatttaataaagctaaacgtgagcgaaat
cttttggattttacagattatgaacattttgctttgaaaattttatacgatgataatggt
cgaccttcaaacatcgcaaacgtttatagagataaatatgaagaaattttagtcgatgaa
tatcaagatacaaatagagtgcaagaacagattatctcaagctttaaacgagggtctgca
tcaaatggtaatttatttatggttggagacgtgaaacaatcgatttataaatttagacaa
gcagatccaagtttattcatcgaaaaatacgaagcgtttaatcaaacagatcacagtggt
tggcgcattgatttgtcgcaaaattttcgctctcgtaaagagatattaaatacaaccaat
tatttgtttcatcatatgatggaccgggaaataggcgaaatcgagtatgatgccgctgca
agattatattacggcgcaccgtttgatgatgttagtgttcctttgcatttaaatgtactc
cttgaagatgaatccagtgagttaactggatctgaacaagaagcacatttgattgcgact
caagtagacactatcatcaacacgaaaaaagtatacgatgtgaaaacaaagctataccgt
ccagcgacgtataaagatatcgtaattttggaaagaagttacagtaatgcacgacacttg
caacatgtatttaaagatagggatatccctttatatgtgaatagtaaacaggggtacttt
gaacaaactgaaatacgtttaatgctttcgttcttgagggtcattgataatccactccaa
gatatttatcttgttggattgatgcgctcggtaatctatcagtttacagaagatgaacta
gcagaaattcgtgttgtctcaccgcatgatgattatttttatcaatctatccaacattac
atgaatgcggaaacggcacaacgtgatttagttgataaattatcgcgatttttaaacgat
ttgtctaactatcgtatatacagtcaaagtcacccggtctatcaattaattgataagatt
tataatgaccattatctaattcagtatttcagtggattagtcggtgggaaagggcggcgc
gcaaacctacatggacttttcaataaagctgtcgactttgaacaatcgagttttagaggt
ttgtttcaattcattcgttttatcgatcaaatgattgaacgcggtaaagactttggtgaa
gaaaatgttatcggaccaaatgacaatgtagtgcggatgatgacgattcatagtagtaag
ggacttgaatttccgtttgtcatatattctggccttacacgtgactttaatatgaccgat
ttgaatcaacctgttattttaaatcaatatgaaggaataggattacaatattatgatgaa
atgcatggcatattttatccgtcattgatttcaatgagtattgaattggttaatcgtaaa
gaaattatttccgaggaaatgagattgatttacgtcgcattaacgcgggcgaaagaacag
ttgtttttaataggtcgtgagaaaaaagaaagtaagttatatgctttaacagaagcgcca
attgcgcatgataagttgacgccactttatcgttttaatgccagaaatccttttgaattg
atttacagtattttaagtaagtataagcattcctcactggtggatgctttgcgatttaaa
gatgaacaagaaaaagaaatggcgcttacaccatcaattacaattcatcatattcaagca
tcagatattttgcctcaatcacatcatgaggatacccgattaagtattgagatgttagat
gcagagaccacgcacgccgtacaaaacgagatgcttatcaaagagattgaaaaccgacta
ttatttaaatatcctcatgaacaagaccaatatttagcatccaaacagtcagtctctgaa
ttaaaacgtcagctcgacacagagcaatctgacacaaactatgaccgtgtccgccaatat
agacttggggtcgcaacatatcaacgaccagcatttttagagtctcaaaaacgtacagcg
actgaagttggaacactgatgcatacagtgatgcaacatttgccttttaatgaagcgcgt
ctttcagatgaggcattacacgaatatatcacatcactcgtcacacgtgctatcattcct
gaagatgcagtgaaagatattcgattagaggatgtgaagcggtttattcagagtgagttg
tacatggaaatcgcacaaagtgacgcattctatcgtgaattaccttttattgtaaatcaa
catgatatggaatcaggagaacatgacacggatgcggccattattcaagggatgattgat
gtggttttcgtgaaaaatggaaagtactattttgtcgattataagacagatgcttttgtt
agacggcgtggtatgtcagatgaagcggtcggtgaacagcttaaagcgaaatatcgaatt
caaatgaattattaccaaaaggctttggaaacgataacaggacacaatgtttcgggttat
ttatacttcttcaagtatggtgccttagcaattgattaa
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