Shouchella hunanensis: PQ477_00530
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Entry
PQ477_00530 CDS
T09126
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
shua
Shouchella hunanensis
Pathway
shua03420
Nucleotide excision repair
shua03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
shua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PQ477_00530
03430 Mismatch repair
PQ477_00530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shua03400
]
PQ477_00530
Enzymes [BR:
shua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PQ477_00530
DNA repair and recombination proteins [BR:
shua03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PQ477_00530
MMR (mismatch excision repair)
Other MMR factors
PQ477_00530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
Motif
Other DBs
NCBI-ProteinID:
WDF03993
LinkDB
All DBs
Position
83605..85893
Genome browser
AA seq
762 aa
AA seq
DB search
MHTARYFNQTVNIHTLERSEWNKLYLASKQGKLTCIHCKAPLRMALSIHKKPSFIHPDPV
NEACYTETSSTMTVQKARTQPREFSGFRLPTNSQIEKEPTNETDWKEPEPLVVRHRFQEP
KRSDRPDDSYRRTLEDASLSFNDDQWRSIKKTDGPLLILAGAGSGKTRVITARAAYMITE
LDIPINRIALVTFTSKAAQEMKERMLLYPGITREIGEKILIRTFHSLFLQMLKHHQSEQW
HHSRLIQSPHYLVKQIGMTLGLDENEFAYDSAVTQISYWKNHMIPPEQVQAKTAFEEKVK
TIYQEYEQQKQFQHYYDFDDILLGCLELLKENSALLEKYQERFSYLSVDEFQDINLLQFE
IVRLLSQKNNNLCVVGDDDQSIYAFRGSDPSFIQSFQSYYPSATVVTLEDNYRSTHEIIG
TANTVIQKNQQRLSKTLRAQVTKMDNTPTIFYPYNEEEEASIIVEEIASTLATGQSIEQI
AVLFRTSAGVRALTERLIDADIPFQLDQTAGTFYDKPIVQKALAFLRLSLYEDHDEAAPY
ALQALFLKQDKQQELIAIKQKRACTLLEAFPFLTGTQPFQKKKLQQLPELCRKLTTLTPI
QALESIEQDIGFKDTLKKQAQEGNQLDKGSDSFRQLKALARQHDTVASFLHYIDCMTVKI
KEHKYRPHSSGVQLLTIHRAKGLEFEHVYIIGCVDRSLPHDYALDALKEGDEAPLQEERR
LLYVAMTRAKSRLYLSSPLYYFENRSFASRFLLPVLKNRSRS
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgcatacagcacgatattttaatcaaaccgttaacatacacacacttgaacgatctgag
tggaataaactgtacttagctagtaagcaaggtaaactgacttgcattcactgtaaagct
cctttacgcatggcactatccattcacaaaaaaccgagctttattcaccctgatccagta
aatgaggcttgttatacagagaccagttcaaccatgactgttcaaaaagcgcggacacaa
ccaagagagttttccggctttcgcttaccaacgaatagccaaattgaaaaggaaccaaca
aatgaaacggattggaaagagccagaaccattagttgtccgacatcgttttcaggaacca
aaacgctccgaccgcccagacgattcttaccgccgcactcttgaagatgcatcgctgtcg
tttaatgatgatcaatggcgcagcataaaaaaaacagacggtcctttgcttattcttgca
ggagctggtagcggaaagacacgtgtcataacagcaagagctgcgtatatgatcacagag
cttgacattccgattaatcgcatcgcgctcgttacctttacatcgaaagcagcacaggaa
atgaaggaacgcatgctactttatcctggtattacgagggaaattggcgaaaaaatactc
attcggacatttcatagcttgtttttacaaatgcttaaacaccatcagagcgagcaatgg
caccactcacgattaattcaatcccctcattaccttgttaaacaaataggtatgaccctt
ggacttgatgaaaatgaatttgcatacgattcagcggttacgcaaataagttattggaag
aatcatatgataccccctgaacaggtacaagccaaaaccgcttttgaggaaaaagtaaaa
acgatttaccaagaatatgaacaacaaaagcagtttcagcactattatgatttcgacgat
atcttattaggttgtttagagctcttaaaagagaactcagctttacttgaaaaataccaa
gaacgattttcttacttatctgttgatgaatttcaagatattaatttacttcaatttgaa
attgtgcgtttgctctctcaaaagaacaataacctttgcgtagtcggtgatgatgatcaa
tccatctatgcctttcgtgggagtgatccgtcctttattcagtcgtttcaatcatattat
ccatcggcaacggttgtgacgcttgaagataattaccgttcaacccatgaaattattggg
acagccaacacggttatacaaaaaaaccagcaacgattatcgaaaaccttacgagctcaa
gtaacaaaaatggacaatacaccaacaattttttatccctacaatgaggaagaggaagca
tcaattattgttgaggaaattgcttctacattggcaaccggtcaatctatcgagcaaatt
gccgttctttttcgaactagcgccggggtacgtgcgctaacagagcgtctcattgatgcc
gacattccctttcaattagatcaaacagctgggacgttttatgataagccaatcgttcag
aaagcacttgcttttttaaggctttctctttatgaggatcatgatgaagccgctccttat
gctttacaagctttattcttaaagcaagataaacaacaagaattaatcgctatcaagcaa
aaacgagcttgtacattacttgaagcattcccatttttaaccggaacacaaccgtttcag
aaaaaaaagttgcaacagctaccagagttatgtagaaaattaacgacactcactcctatt
caagcgcttgaaagtattgaacaagatatcggttttaaagatacactaaagaaacaagct
caagaaggaaatcagctggacaaaggaagcgattcgtttagacaattaaaagcattagcc
aggcaacatgatactgttgcttcctttctccattatattgactgtatgacggtaaaaata
aaagaacataagtaccgtccccattcttcaggtgtacagttattaaccattcatcgtgca
aaagggctagagtttgagcatgtctatattattggctgtgtggatcggtctcttccacat
gattatgccttagacgctttaaaagaaggagacgaagcccctctacaagaagagcgacgc
ttgttgtatgtagcgatgacacgagcaaaatcacgcttgtacctttcttctcctctttat
tattttgagaatagaagcttcgcgtctcgcttcttgcttcctgtattaaaaaaccgctca
cggtcgtga
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