Shouchella hunanensis: PQ477_01565
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Entry
PQ477_01565 CDS
T09126
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
shua
Shouchella hunanensis
Pathway
shua03030
DNA replication
shua03410
Base excision repair
shua03420
Nucleotide excision repair
shua03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PQ477_01565 (polA)
03410 Base excision repair
PQ477_01565 (polA)
03420 Nucleotide excision repair
PQ477_01565 (polA)
03440 Homologous recombination
PQ477_01565 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shua03032
]
PQ477_01565 (polA)
03400 DNA repair and recombination proteins [BR:
shua03400
]
PQ477_01565 (polA)
Enzymes [BR:
shua01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PQ477_01565 (polA)
DNA replication proteins [BR:
shua03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PQ477_01565 (polA)
DNA repair and recombination proteins [BR:
shua03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PQ477_01565 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PQ477_01565 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
ChlI
HHH
HHH_2
Motif
Other DBs
NCBI-ProteinID:
WDF04193
LinkDB
All DBs
Position
complement(280321..282948)
Genome browser
AA seq
875 aa
AA seq
DB search
MKKLVLIDGNSIAYRAFFALPLLSNEKGEYTNAVYGFTTMLLKVLEEEKPTHLFVAFDAG
KSTFRHKTYAEYKGTRQKTPSELSGQIPMIHKLLDAFSIKRYEAKEYEADDIIGTQAVEA
AKEGFEVVVITGDKDLLQLVDDHIEVVLTRKGITEVDRYNEAKIEERYGLTPKQIIDLKG
LMGDTSDNIPGVPGVGEKTAIKLLTQFSDVETVLDSINEVSGKKLKERLEENKEQAILSK
QLATIMTEVPLETALNDLAYNGFDYQAVKELFKAYAFNSLLNRIGGNEDQKEEALEKVPF
EVVSEIKEDHLVSPSALVIEMLGDNYHHADIIGVGLANKNGSYFIPTKVAVESDLFQTFM
ADQKKEKYLFDAKRAVVALAWQDIELHGVAFDLQMASYLLDPSLSSHEMSDIASRKGSVR
VLEDETVYGKGAKQAIPDEQQLAAHLSRKAYAMYVLKDILANELKENEQFSLFAELEMPL
SVILGRMEKEGIKVDRSQLQNMGDDLSTRLANLEKEIHKEAGETFNINSPKQLGQVLFET
LELPPVKKTKTGYSTSADVLEKLAGSHPIIEHILLYRQLGKLYSTYIEGLLKVADEQSGK
VHTRFNQALTQTGRLSSTDPNLQNIPIRLEEGRKIRKAFVPSQEGWVMVSADYSQIELRV
LAHISGDERMKEAFLKDMDIHTKTAMDVFHVEEHEVTDQMRRSAKAVNFGIVYGISDYGL
SQNLNITRKEAKAFIDRYLASYPDVKAYMENVVKEAKKTGYVQTLLARRRYLPELASSNF
NQRSFAERTAMNTPIQGTAADIIKQAMVNMSDELASSSLKVTMLLQVHDELIFEVAPEDE
QALKELVTNVMENALSLDVPLQVDVSSGSSWYDAK
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaaattagtattaattgacggaaatagtattgcctaccgagcctttttcgcatta
ccgcttttaagcaatgaaaaaggggaatatacgaacgcagtttatggttttacaacgatg
cttttaaaagtacttgaggaagaaaagcccactcatttattcgtagcatttgatgcaggc
aaatcgacatttcgacataagacgtatgctgaatataaagggacgcgtcaaaaaacacct
tcagaattatccggtcaaattcctatgattcataagcttttagatgctttttctataaaa
cgatatgaagcaaaagagtacgaagcagatgatattattggaacacaggctgtagaagca
gcaaaagaagggtttgaggttgttgtcattacgggagataaagatttactccaacttgtt
gatgaccatatcgaagtcgtgcttactcgaaaaggaataaccgaagttgatcgttataat
gaagcgaaaatagaagagcgatacgggctaacacccaaacaaattattgatttaaaagga
cttatgggggatacctctgataatatccctggtgttcctggtgttggagagaaaacggct
attaagctgttaactcaattctcagacgtggaaactgtacttgactcgattaatgaggtt
tcagggaaaaagcttaaagagcggttagaggaaaataaagaacaagcgattttaagtaaa
caacttgcaaccattatgacggaagtaccgttagaaacggctcttaacgacttagcatat
aacggatttgattatcaagcagttaaggaattgtttaaagcatatgcatttaattcttta
ttaaatcggattggtggcaatgaagatcaaaaagaagaggcattggagaaagtgccattt
gaagtggtttcggagataaaggaagatcatcttgtcagtccatccgctttagtgattgaa
atgctcggtgacaattatcatcatgctgatattatcggggttggcttagcaaataaaaat
gggagctactttattccgacaaaggttgctgtagagtcagatctctttcaaacgtttatg
gccgatcagaagaaagaaaagtatttgtttgatgcgaaacgagcagttgttgcgttagca
tggcaagatattgaattacatggtgttgctttcgatttacaaatggcatcatatttactt
gatccgtctctttcttcccatgaaatgagcgatattgcatctcgaaaaggatcagtccgt
gtcttagaagatgaaaccgtttatggaaaaggggcaaagcaagcaattcctgatgagcag
cagcttgctgcgcatttatctagaaaagcttatgcgatgtatgtattaaaagacatattg
gcaaatgagctgaaggaaaacgaacaattttcgctttttgcagaacttgaaatgccgtta
tctgttatattaggacgaatggagaaagaaggcatcaaagtcgaccgctcgcagcttcag
aacatgggtgacgatttatcgacacgattagcaaatcttgaaaaagagattcataaagaa
gctggtgagacgtttaacattaattctccgaagcaattaggacaagtattatttgaaacg
ttagagcttccgccagtaaagaaaacaaaaacaggttattctacaagtgcagatgtatta
gagaaattagcaggttcgcacccaattattgaacatattttactctatcgtcagctcgga
aagctgtattcaacctacattgaaggattgttaaaagtagcggatgagcagtcaggaaaa
gtgcacacacgatttaatcaagcacttacacaaactggacggctttcttcaacagatccc
aacttgcaaaatattccgatacgactagaagaaggaagaaaaatccgtaaagcatttgta
ccgtctcaagagggttgggtgatggtgtctgctgactattcacaaattgaattacgagta
cttgcacacatatcaggcgacgaaagaatgaaagaagcatttttgaaggatatggatatc
catacaaaaacggctatggacgtgtttcatgttgaagaacatgaagtgacggatcaaatg
aggcgtagcgcaaaagcagtaaacttcggtattgtttatggaattagtgattacggtctc
tcgcaaaatttaaacatcactcgaaaagaagcaaaagcatttatagatcgttatttggct
agctaccctgatgtaaaagcatatatggaaaatgtcgtaaaagaagcaaagaaaacaggt
tatgttcaaacgttattggcgagacgtcggtatttgcctgagttagctagtagtaatttt
aatcaacgtagttttgccgaacgtacggcaatgaatacgcctattcaagggacggctgcg
gatattattaagcaagcgatggtaaatatgagtgacgaactagcgagttcttcgttgaaa
gtcacgatgttgttacaggtacacgatgaattgatttttgaagttgcgccagaagacgaa
caggctttgaaggaacttgttacaaatgtaatggaaaatgcattatcattagatgttccc
ctacaggtagacgtgtcaagcggttcttcttggtatgacgcaaagtaa
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