Shouchella hunanensis: PQ477_01640
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Entry
PQ477_01640 CDS
T09126
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
shua
Shouchella hunanensis
Pathway
shua03030
DNA replication
shua03430
Mismatch repair
shua03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PQ477_01640
03430 Mismatch repair
PQ477_01640
03440 Homologous recombination
PQ477_01640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shua03032
]
PQ477_01640
03400 DNA repair and recombination proteins [BR:
shua03400
]
PQ477_01640
Enzymes [BR:
shua01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PQ477_01640
DNA replication proteins [BR:
shua03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PQ477_01640
DNA repair and recombination proteins [BR:
shua03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PQ477_01640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
HROB
DNA_pol_IIIA_C
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
WDF04207
LinkDB
All DBs
Position
complement(297953..301231)
Genome browser
AA seq
1092 aa
AA seq
DB search
MSTLLSNIYSEHSLLQSGLTIKAYVQQAKQLGYKNLALTDKHTLSGVYDFLKECEKVDMK
PLVGLECTVLVKDVRLTVRLLAKNKQGYQQLVELSSAMRMSKENGISYEVFQQHTTACIV
LLSRQSFTQAKDWHKRWLALTSHSEGRLEIHGASDYTLIEFAEAHGIVCVAAPPIRFLKE
ENYDFYRLLTAIGAGTTVDHVVLEEESENAYLLSLTERKKRFSEALLQETDALADKIETF
TLFQKPTIPRFDGLEEKEAHEQLQEKAMKGFQQRYQSNPSEEAMERLEKELNVIKQLGFA
SYFLIVADFMNYAHRSNILTGPGRGSSASSIVAYALRITDVDPLKHGLLFERFLNPERIS
LPDIDIDFPDYRRDDVIQYVRERFGNDHVAQVLTFGTFAGKASIRDAGKAFGLNSGFVDR
VAKAMNSALTLEEAEQQGLFSSFQSTELDTLLFFAKQLEGMLRHESTHAAGVIISDRPLK
EKVALQYGSDERVITQADMDSLDALGYVKFDFLGLKNLTLLEQMLRLIEGATNQKLNLRD
IPFDDEKTFRLLQQGESTGIFQLESDGMRRVLKQLKPSSFNDIVATTSLYRPGPMTFIKD
YIQSKHEQKKTFSHHVEINRILQPTFGVIVYQEQIIQLIQISAGYSLAEADIFRRAISKK
QRELMNKDSFVERSIARGYTKEEAETLFTLIEKFSNYGFPKSHATAYSMISYWLAYLRVH
YQEAFFAALCSANWQDHQKLYNYIYEARKAGVEVLPPSIQDSHALFTVEKACIRFGLLPI
TTVNRRIVDQIKEARTTPFQDFFTFVAKVYSSTITQPVLTALIKAGACDHWGYSRAVLLA
NVDKAIAFAKQIDDFKQSAGSLFTINPVTPAYIDIEPSTKMEEIGWEREVLGFYFSGHPI
ENEKERLAPFHRTTLIQAEPSRKGIRVGVLVKALKKITTKKGKAMAFFIGSDETEECECV
VFPTVWKDVETVLTEGSLVLLHGIVEEREGKKQFIVQKAIDLNQLPSTESKQFLHVYIEK
EQDVPTKLSDLKYILSQDRGTAPVILYRKKNHTKIKLPDKYAVQPSKRTIQLLKRLFGED
NVRIEEREDEQE
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
ttgagcaccttgctttcaaatatttatagtgagcatagtctacttcagtccggcttaacg
ataaaagcctatgtacagcaagctaagcaattaggatataaaaaccttgcattaacagac
aagcatacattaagtggcgtgtacgatttcttaaaagagtgtgagaaagttgatatgaaa
ccattggtcgggctagaatgcacagtccttgttaaagacgttcgacttaccgtacgcttg
cttgctaaaaataagcaaggttatcaacaactagttgaactaagctcagcgatgcggatg
agcaaggagaacggaatttcatatgaagtttttcagcaacatacaacggcgtgtattgtt
ttattgtcgcgtcagtcatttactcaagcgaaggactggcacaaaaggtggttagcactt
acttcacatagtgaaggaagattagaaattcatggtgcaagtgattatacacttatcgaa
tttgcggaagcgcatggtattgtatgcgtggcagcaccgcctattcgatttttgaaagag
gaaaactacgatttctatcgtttgctcactgcaattggcgcaggaacaacggtggatcat
gtagtgctagaagaagaatcggaaaacgcgtacttattgtcgttaacagaacggaagaaa
cggttctcagaagcacttctgcaggagacggatgcgttggctgacaagatagagacgttt
actctttttcaaaagccgactatcccacgctttgacggtttagaagaaaaagaggcacat
gaacaactgcaggaaaaagcaatgaaaggatttcagcaacggtaccagtccaacccttcg
gaagaagcaatggagcgattggaaaaagaactaaacgtaattaaacagcttggttttgct
tcgtacttcttaattgtggctgattttatgaattatgctcatcgctctaatattcttaca
gggccaggaaggggttcctctgctagctctattgttgcttatgcattgcgtattacagat
gttgatcctcttaagcatggtctgctctttgaacgttttttaaatccagagcgaatttcg
ctaccagatattgatattgattttcctgattaccgtcgagacgatgtgattcaatacgtt
cgagaacggtttggaaacgatcacgtcgcgcaagtgttgacgttcggtacgtttgcagga
aaagcgtccattcgagatgcaggaaaagcgtttggactgaacagtggcttcgttgatcgt
gttgcaaaggcgatgaattcagcgctcacattggaagaggctgaacagcaagggctattt
tcatcgtttcaatcaactgagcttgatacacttcttttctttgcaaagcaattagaaggc
atgctcagacatgaatcaactcatgctgctggagtgattattagcgatcgtccccttaaa
gaaaaagtagctcttcagtatggaagcgatgaacgggtcattacacaagcggatatggat
agtcttgatgcgctcgggtacgtaaaatttgattttcttggcttgaagaatttgacattg
cttgaacagatgctccgtttaattgaaggagcaacaaatcagaaactcaatttgcgcgat
attccattcgatgatgagaagacgtttcgcttattacaacaaggagaatcaacgggtatt
ttccaattagaatcagacggaatgagacgtgtgttaaagcagttaaagccgtccagtttt
aatgatattgtcgcaacgacttcgttgtatcgaccaggtccaatgacatttattaaagac
tatattcaaagcaaacatgagcagaaaaaaacattttctcaccatgtggagattaaccgc
attctacaaccaactttcggtgtcatcgtctaccaggaacaaattattcaattgatacaa
attagtgctggatatagtcttgctgaggcagacatatttcgacgagccatcagtaaaaaa
cagcgagagttaatgaataaggattcttttgtcgagcggtcgatagcacgaggttatacg
aaagaggaagcagagacgttatttacattaattgaaaaattttcgaattacggatttcca
aagtctcacgcaacggcttacagtatgatcagttattggctggcttatttgcgtgtgcac
taccaagaagcgttttttgcggcactctgttcagccaattggcaagatcatcagaagctt
tacaactatatttatgaagctagaaaagcaggcgttgaggtgcttccaccatctattcaa
gatagtcatgctttatttactgtggaaaaagcgtgcattcgctttgggctacttccaatt
acaaccgtaaatcggcgcatcgtagatcaaattaaagaagcaagaacgacaccgttccaa
gatttctttacctttgttgcaaaggtgtattcttcaaccatcacgcaaccagttctaact
gcattaattaaagccggtgcatgtgatcattggggatattcacgagcggttttattggca
aacgtagataaagcaattgcatttgctaaacaaattgatgattttaagcagtcagcaggt
agtttgtttacgattaatccagttacacctgcctatatagatattgaaccatcaacaaag
atggaagaaatcgggtgggagagagaagtgcttgggttttacttctctggtcatccaatt
gaaaatgaaaaggagcgtctcgcgccttttcaccgcacgacacttatccaagcggaacct
tcaagaaaaggtattcgagtaggggtgttagtgaaagcactaaaaaaaattacaacaaaa
aaagggaaagcaatggctttttttattggaagtgacgagacggaagaatgtgagtgtgta
gtttttcctactgtgtggaaagatgtggaaacggtcttaactgagggaagcctcgtgctt
ttacatggaattgtagaggaaagagaaggaaaaaaacagttcattgttcaaaaagcgatt
gatctgaatcaactgccgtcaactgaaagtaaacaatttctacacgtttatattgaaaaa
gagcaagatgtgccgacgaaattaagtgatttaaaatacatcttaagccaagataggggg
acagcacctgtcatcctatatcgaaaaaaaaatcataccaaaataaagcttccagataaa
tatgctgtgcagccgtcaaagcgaacgatccagcttttaaaacggttatttggtgaagat
aacgtccgcatagaagaacgtgaggatgagcaagaataa
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