Shouchella hunanensis: PQ477_02840
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Entry
PQ477_02840 CDS
T09126
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
shua
Shouchella hunanensis
Pathway
shua03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
shua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PQ477_02840 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shua03400
]
PQ477_02840 (uvrB)
DNA repair and recombination proteins [BR:
shua03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PQ477_02840 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PQ477_02840 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UvrD-helicase
THDPS_N_2
AAA_7
TrwB_AAD_bind
HerA_C
Kinesin
AAA_5
AAA_22
P-loop_SecA
UB2H
DUF87
AAA
Motif
Other DBs
NCBI-ProteinID:
WDF04430
UniProt:
A0ABY7W654
LinkDB
All DBs
Position
complement(520259..522241)
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AA seq
660 aa
AA seq
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MDQTFQLVSDYSPQGDQPTAIEKIVRAIENGDRHQTLLGATGTGKTFTMSNVIQAVNKPT
LIMAHNKTLAGQLYSEFKQFFPHNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDEID
KLRHSATSALFERRDVIIVASVSCIYGLGNPEEYRDLVLSIRTGMEMDRNELLRRLVDIQ
YDRNDLNFIRGTFRVRGDVVEIFPASRDEQCIRVEFFGDEVDRMTEVDALTGEIKGERNH
VSIFPASHFVTREEKMKKAIENIEAELEERLKALHADGKLLEAQRLEQRTRYDLEMMAEM
GFCSGIENYSRHLTLRESGATPYTLIDFFPEDFLLIMDESHVTLPQVRGMYNGDRARKEV
LVNHGFRLPSALDNRPLKFAEFEEKISQAVYVSATPGQYELEHTPEMVEQIIRPTGLLDP
PIEVRPIEGQIDDLIGEIHEQIERDERVLVTTLTKKMSEDLTDYLKEIGIKVRYLHSEVK
TLDRLEIIRQLRLGTFDVLIGINLLREGLDIPEVSLVAILDADKEGFLRAERSLIQTIGR
AARNEHGRVIMYADKITGSMEVAISETKRRREIQEAFNKKHGITPQTIQKKIPDVVQATY
AAEDEGEYDVTKKPQQKMTKKEREKTIAQIEVEMKQAAKDLNFERAAELRDMLLELKAEG
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaacgtttcaattagtatcagactactcgccacaaggtgatcaaccaactgca
atagaaaaaattgtacgtgcaattgaaaatggggatcggcatcaaacgttattaggtgca
acgggtacaggaaaaacgtttacgatgtccaacgtcattcaagcagtgaataagccgacg
ctcattatggcccataataaaacactagcaggtcagctttatagtgaatttaaacagttt
tttcctcataatgcggttgagtattttgttagctattacgattattatcaaccggaagca
tatgtaccttcttctgatacgtttattgaaaaagacgcaagtattaatgatgaaattgat
aagttacggcactcagctactagtgcgttgtttgagagacgggatgtcattattgtagcg
agtgtatcgtgtatatatggtttagggaacccggaagaataccgggatcttgtcttgtcc
attcgtaccgggatggaaatggatcggaatgaattattacgacgccttgtcgatattcag
tatgatcgtaacgatttgaattttatacgtggaacattccgagtaagaggcgatgtggtt
gaaatcttcccggcatcgagagacgagcaatgtattcgagtggaatttttcggtgacgaa
gttgatcgtatgaccgaagtcgatgcattaactggagagatcaagggagagcgaaaccat
gtatcgatttttccagcctctcactttgttacccgtgaagaaaaaatgaaaaaagcaatt
gaaaatattgaagccgaactagaagaacgattaaaagcgcttcatgcggatggaaagttg
cttgaagcacaaagacttgagcaacgaacacgctatgatcttgaaatgatggcggagatg
ggattttgttcaggcattgaaaactactctaggcatttaaccttacgtgagtcaggggca
accccgtacacgttaattgatttctttccagaagactttctattaattatggatgaatct
cacgtaacattaccgcaagtaagagggatgtacaatggtgaccgagcgcgaaaagaagta
ctcgttaaccatggctttcgtttgccgtctgcactcgataacagaccattaaaattcgct
gaatttgaagaaaaaataagtcaagccgtttacgtatcggctacgcctggccagtatgag
ctagagcacactcctgagatggttgaacaaattattcgaccaactggcttgcttgatcca
ccaattgaagtccgaccaattgaagggcaaattgatgatttaattggagaaatccatgag
cagattgagcgtgacgaacgtgtcttagtgacgaccttaacgaaaaaaatgtctgaggac
ttaacggactacttaaaggaaattggaattaaagttcgttatttacattcagaagtaaaa
acgttagaccgtctagagatcattcgtcagcttcgattggggacgtttgatgtccttatt
gggatcaatttattaagagaagggttagatattccagaagtatctcttgtcgcgatttta
gatgctgataaagaaggattcttacgtgcagagcgatctcttattcaaacaattggacgt
gctgctcgaaatgaacacggtcgagttattatgtacgcagataaaataaccggttcaatg
gaagtcgcgattagtgaaacaaaacgtcgtcgagaaattcaagaagcctttaataaaaaa
cacggcattacgccacaaacaattcaaaagaaaatcccggatgtggtgcaagcgacctat
gctgctgaagatgaaggggaatatgacgtaacgaagaaaccgcaacaaaaaatgacgaaa
aaagaacgcgaaaaaacaattgctcaaatagaagtagaaatgaagcaagcggcaaaagac
ttaaacttcgagcgggcagcagagcttcgagatatgctgttagagcttaaagcggaagga
tga
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