Shouchella hunanensis: PQ477_04005
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Entry
PQ477_04005 CDS
T09126
Name
(GenBank) helix-turn-helix transcriptional regulator
KO
K20480
HTH-type transcriptional regulator, quorum sensing regulator NprR
Organism
shua
Shouchella hunanensis
Pathway
shua02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
shua00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PQ477_04005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shua03000
]
PQ477_04005
Transcription factors [BR:
shua03000
]
Prokaryotic type
Helix-turn-helix
Other families
PQ477_04005
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
HTH_3
TPR_2
TPR_8
TPR_MalT
HTH_31
HTH_19
Motif
Other DBs
NCBI-ProteinID:
WDF04632
UniProt:
A0ABY7WA03
LinkDB
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Position
735434..736693
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AA seq
419 aa
AA seq
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MELGRTIKYYRIKHNMTQAELADGICSIPHLSKIENSIYNANFGTAALLLERLGINIEEE
YAQHSEIKHTLDAFIEAIQFADEEKALEYYESLLDKETVIPRTNYRNMYHLYMMRYHLMN
GHLTLAFKDWSIVDKNRSNLDPIEELSAELFYGIYLVELGRLKEAKQLLLSIKNAEHSSH
YLFAREIAFILSHCYTELNEPEKAIIYAKEALYLFKQEDNYIRTAQSQMVLGINYTQLNM
LEESLRVFKVLLRNSRLFGQQSLYFQATYNYGILLKKSGDYEASHDCFLQCTNFYEPSSK
NYLYARLADVEVLFLLNAEKTSIRDILVEIIEQSVTQAHERLELQARYYMYRLESSEQLY
HFIETELLPHLERLESHAELLPYARELAHWYQQNGHYEKANEYLQKYSSISTKKDLSMV
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
gtggagctaggtagaacaattaagtactaccggattaaacataacatgacacaagctgaa
ctcgctgatggtatatgttctattccacatttaagcaaaattgaaaattcaatatataat
gctaatttcgggactgcagcactacttttagaaagactcggaattaatattgaagaagaa
tatgcccagcactcagaaattaaacacacgctcgatgcgtttatagaagccattcaattc
gctgacgaagagaaagcacttgaatactatgaatcgcttcttgataaagaaacggttata
ccgcggaccaattatcgtaatatgtatcatttgtacatgatgcgctaccatttaatgaac
ggtcatttaactctcgcatttaaagattggagtattgtcgacaagaacaggagtaatctc
gatcctattgaagaactttccgccgagttgttctatggcatttatttagttgaactcgga
cgacttaaagaagctaaacagctattgcttagtattaaaaatgcagaacattcatcacac
tatcttttcgctcgagaaatcgcatttattttatcccattgttataccgaattaaacgag
cctgaaaaagccattatttatgcaaaagaagcactttacctatttaaacaagaagataat
tatatacgcactgcccaatcacaaatggtgttaggcattaattatacacagttaaatatg
ctcgaagaatcccttcgtgtgtttaaagtcctcttgcgtaattcgcgactattcggtcaa
caatcgctttattttcaagcaacctataattatggcatcctcttaaagaaaagtggcgat
tacgaagcgagtcacgactgtttcttgcaatgcacaaacttttatgaaccttctagcaaa
aactacctctatgctcgtttagccgatgtagaagtgctgtttttattaaatgccgaaaaa
acgagtattcgtgacatattagttgaaataattgagcaaagcgttacacaggctcatgaa
cgattagagctccaagcacgttattatatgtatcgtcttgaatcgtctgaacaactctat
cattttatagaaacggaattgttgccgcatttggaacgattagaaagccatgcggaattg
ttgccctatgctcgagagttagctcattggtaccaacaaaatggacactatgagaaagcc
aatgaatacttacagaaatactcttccatttcgacgaagaaagatttgtccatggtctaa
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