Shouchella hunanensis: PQ477_06550
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Entry
PQ477_06550 CDS
T09126
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
shua
Shouchella hunanensis
Pathway
shua03030
DNA replication
shua03430
Mismatch repair
shua03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PQ477_06550
03430 Mismatch repair
PQ477_06550
03440 Homologous recombination
PQ477_06550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shua03032
]
PQ477_06550
03400 DNA repair and recombination proteins [BR:
shua03400
]
PQ477_06550
Enzymes [BR:
shua01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PQ477_06550
DNA replication proteins [BR:
shua03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PQ477_06550
DNA repair and recombination proteins [BR:
shua03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PQ477_06550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DEDDh_C
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
WDF05123
UniProt:
A0ABY7W855
LinkDB
All DBs
Position
complement(1263024..1263737)
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AA seq
237 aa
AA seq
DB search
MNLMTIMRQISARFTSGVSSSNSDQASQMARFRHYQKEAQKDVLDEPLHELPMVVFDLET
SGFQPDYGDSILSIGAVKIKGSSILHDHFYKTIKPKRTPSAEILQLTGLTTAELEQSEAL
KDVLLAFYQFVGSSTLIAHHAAHERRFMRHATWHELGRTFTHRLIDTSFLTQLTAAHQSF
EQLEEWCHAYDIVVGNRHHALADAHMAAQLWVKHLVVADHAGYSTLSDLYKALAAKK
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgaacttaatgacaatcatgcggcaaatttcggcacgatttacttcaggtgtttcgtcc
tcaaactccgatcaagcaagtcaaatggcgcgctttcgtcattatcaaaaggaagcgcaa
aaggatgtgctggatgaaccgctacatgaactaccaatggttgtttttgacctagagaca
agtggatttcagccagattatggtgattcgattctttcaatcggagcagtgaaaattaaa
ggttcttcaatcttacatgaccatttctataaaacgattaagccaaaacggaccccatct
gcagaaattttacaactaaccgggttaactacggcagagttagaacaatcagaggcgtta
aaggacgttttattggcattttaccagtttgttggttcatcaacccttattgctcaccat
gctgcccatgagcgacgatttatgcggcatgctacatggcatgaactcggtcgaacgttc
acacatcgattaattgatacatcctttttgacgcagcttacagcagcacatcagtcgttt
gaacagttagaagagtggtgtcatgcgtacgatattgtagtagggaatcgtcatcatgct
cttgcagatgcgcatatggccgctcaattatgggtgaagcacctagtggttgccgatcat
gctggctactcaactctatctgacttatacaaagcgcttgctgctaaaaagtag
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