Shouchella hunanensis: PQ477_07835
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Entry
PQ477_07835 CDS
T09126
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
shua
Shouchella hunanensis
Pathway
shua03030
DNA replication
shua03430
Mismatch repair
shua03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PQ477_07835 (holB)
03430 Mismatch repair
PQ477_07835 (holB)
03440 Homologous recombination
PQ477_07835 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shua03032
]
PQ477_07835 (holB)
03400 DNA repair and recombination proteins [BR:
shua03400
]
PQ477_07835 (holB)
Enzymes [BR:
shua01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PQ477_07835 (holB)
DNA replication proteins [BR:
shua03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PQ477_07835 (holB)
DNA repair and recombination proteins [BR:
shua03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PQ477_07835 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
Motif
Other DBs
NCBI-ProteinID:
WDF05355
UniProt:
A0ABY7WFA7
LinkDB
All DBs
Position
1540146..1541135
Genome browser
AA seq
329 aa
AA seq
DB search
MNNWNDWIEAQPQVVPMLVESIKKQRLAHAYLFDGQAGSGTMELAILLSKSFMCQEKQGA
NPCLTCLDCTRIDSGNHPDLHKIAPDGQSIKREQVDYLQKEFSYRGVESRQKVYIVSDAD
KMTGTAANTLLKFLEEPQGETLAILLTEQVENVLPTIRSRAQHIRFHPPLKEEIVKQLME
NGIDQKHSSFLAELTENKEAALRLTEDDWSFQARGVVLQLMHELYTRPDQAIITLAEKWL
PLMKERIHQEMGLEMMTLWLRDLLYIRVGKQGELVYSDFYESYKELSLSTSQRLITLSLA
KVMEAKSQLSANVAVQLVMERLLFTIQEG
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgaataattggaacgattggatagaggcacagccacaggttgtgcctatgttagtagag
agcataaaaaaacaacgtcttgcgcatgcttacttgtttgacggacaagctggaagtgga
accatggagcttgctattcttctctctaaaagttttatgtgccaggaaaagcaaggggcg
aatccttgtttaacatgcttagattgtacacgaatagactctggtaaccatcctgatcta
cataagattgcgcctgatggtcagtcaatcaaacgggagcaagtggattacctccaaaaa
gagttttcttatcgaggagtggaatcacgacaaaaagtgtacattgtctctgatgcggat
aagatgacaggaacggccgctaatacgttattgaagtttttagaagagccgcaaggagag
acattagcgatccttctgacggaacaggttgaaaatgtgttaccgacgattagaagtcga
gcacagcacatacggtttcaccctccactaaaagaagaaattgtaaagcaactaatggag
aatgggattgatcaaaaacatagttcgtttttagccgaactcacagaaaataaagaggca
gcattacgtctaacagaagacgactggtcttttcaagccagaggtgtagtgttacaattg
atgcatgagttatacacaagacctgatcaagcaattattacgttagctgaaaagtggctg
ccgttaatgaaagagcgcattcatcaggaaatgggtcttgaaatgatgactttatggttg
cgagaccttttatatatacgagttggaaagcaaggagagcttgtttatagcgatttttat
gaatcctataaagagttgtcgctatcaacatcacagcgtctcattaccctttcgttggct
aaagtgatggaagcaaaaagccaacttagtgctaatgttgccgtacagttagtgatggaa
agattgcttttcacgatacaggagggctag
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