Shouchella hunanensis: PQ477_12135
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Entry
PQ477_12135 CDS
T09126
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
shua
Shouchella hunanensis
Brite
KEGG Orthology (KO) [BR:
shua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shua03400
]
PQ477_12135 (addB)
Enzymes [BR:
shua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PQ477_12135 (addB)
DNA repair and recombination proteins [BR:
shua03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
PQ477_12135 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
Methyltransf_11
Motif
Other DBs
NCBI-ProteinID:
WDF02272
LinkDB
All DBs
Position
2389412..2392858
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AA seq
1148 aa
AA seq
DB search
MIHFYLGRSGSGKSTKLKKEAIDQLNRFPIEGPEQLFLVPDQMSFQVEYELAKKSGGFSK
LSVLSLQSLAERILVETDQQELPLLDRTGMHVLLRKIVEEQKEKLRIFKRSSHATGFVQE
MEQVIIELRQQELTADAFYKASRNQSQLIQDKMHDIYIVYKGFEQAFQQRFTDKENQLKH
ATDVLATSNVVKDAVIYVDGFYDFNKLERRFLTTLFKEASSVQIALTLDKDATLDTFFYT
NETYQRLVETLQQQGLSYKTSWFEPSLRFKRKGIASLEEALVYQDHEKRENDGSVQLVEA
VNRRVEIDALARSIRSYVRTEGYRYSDIAVVTRDLTLYSDLIERIFPMYDLPFFVDQTKP
MIHHPLIEFIRSSLEAIMQRYPYEALFRAFKTDLFIPLDEDSIRFREQIDQLETIVLAQG
IKGKLWSTDVEWRVKTARHGYEDEPTEEEMETNHAVNELKNQLIAPLNQLEKQIKQSKTI
FEMSRALYTFFEALSIPDKINQVKEQAEAEGAIQLGSEYQQVWDGVIRILDQLVEIGGDN
ATTPQAFLKTLNAGFENMSFRMVPPAIDQVTVGDMERSRLPKVRVTFVIGVNEGVIPSTP
RDKGIVSAQERHELKEKGVSFGYSSFDRIWHEHFYAYIAQTNAEEKLVVSYALADEEGAA
LLPSPLIRYIKDTLDSVPFTFVQNEADAVNENHSIEYVSHPKQAFMELIRQLQKWKQGET
IDSIWWDVYHWFIQQEHWQSRLKMGLQSLDYAYKEVPLPIEKARDLYGSELVMSVSRMEL
FKQCSFRHFSQYGLKLKERDVYKLEAFDIGELFHMVLKLMSTKQKDRNKTWKKLSYDECR
EMTIAAVEEVAPIIQRKILLSTSHYQYITDKLKEIALNVTEALRQQALLSKFETIGLEVA
FGPQTNLSLPSYSLEHGMNMTVRGRIDRIDQAKVDGQSYLSIIDYKSSATALAFSDVIEG
LSLQIPVYLTVALKGSKAWLDEPSQIGGMFYFHIHNPVLEDAEHAEEERLKAFKLSGWMP
KDRQLATLFDQSLEEAAKSKIVPVEFKKDGTFHSRSKVVTEDDFRTLFAYTEQKIVEIGN
DIVSGKTEVKPFQRENGHVACSFCPMQAVCQFDPTLPGYDYNEIYKKAHRDALEEMRDIL
GEGEGEDA
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
gtgattcacttttatctcggaagaagtggcagtggtaagtcgacgaaacttaaaaaagaa
gcgatcgaccagctaaatcgctttcctattgaagggcctgaacagctgtttcttgttcca
gatcaaatgtctttccaagttgaatatgagcttgcaaaaaagtcaggaggattttctaag
ttaagtgttctaagcttgcagtcattagcagaaagaattcttgtagaaacggatcaacaa
gagctaccgttgcttgaccgaacaggcatgcacgttttgcttaggaaaatcgttgaagaa
caaaaggaaaagttgcggatttttaagcgttcaagtcatgcaaccggttttgttcaagag
atggaacaagtcattatagagctccgtcagcaagaactaaccgcagatgcgttttataaa
gcaagtaggaatcagtcacaattgattcaagacaaaatgcatgatatctatatcgtctat
aaagggtttgaacaagcttttcaacagcggtttacggacaaagaaaatcaacttaagcat
gctacggacgtattggcaacgtcaaatgttgtaaaagatgcggtcatttatgtggacggg
ttctatgattttaataagctagagcgtcggtttttaacgacactgtttaaagaggcatcg
tctgtacagattgcattaacgttagacaaggatgcaacattggatacgtttttctacacg
aatgagacctatcaaaggttagtagaaacgcttcaacaacaaggtttatcttataaaacg
agttggtttgaaccgagcttgcgatttaagagaaaaggcattgcatcattagaagaagcg
ctcgtgtatcaagatcacgaaaagcgagaaaatgacggcagtgtccagttagtagaagcg
gtaaatcgacgggttgaaatagatgcacttgcccgttccattcggtcttatgtacgaacg
gaaggctatcgatattcagacattgccgttgtaaccagggacttaactctttacagtgat
ttaattgaacgaatctttccgatgtatgacctgccgtttttcgttgaccagacaaagcca
atgattcatcatccattaattgagtttattcgctcttccttagaagctatcatgcagcgt
tatccttatgaagcgctttttcgtgctttcaaaaccgatttatttattccacttgatgaa
gattcgatacgctttcgcgaacaaattgatcagttagaaacgattgttctcgcgcaggga
ataaaaggaaagttatggtcaacggatgtagaatggcgagtgaaaaccgcacgacatgga
tatgaggatgagccaacagaggaagaaatggaaacgaatcacgctgtaaatgaattgaaa
aaccaattaatcgcacctcttaatcagttagagaagcagataaagcaaagtaaaactatt
ttcgagatgagtcgagccctttataccttctttgaagctttatctattcctgacaagata
aatcaggtaaaagaacaagcggaagcggaaggggctattcaactaggtagtgaatatcaa
caagtgtgggacggagtcatacgaattctagatcagcttgttgaaattggtggagacaat
gccacaacgccccaagcgtttcttaagacattaaatgctggttttgagaatatgagcttt
cgaatggtgccaccggcgattgatcaagtaacagtcggtgatatggagcgatcccgcttg
ccaaaagtacgcgtaacatttgtcatcggtgtaaatgaaggtgtgattccatcaacgcct
agagacaaagggattgttagtgcacaggagcgccatgaacttaaagaaaagggcgtctct
ttcggttatagctcgtttgatcgaatttggcatgaacatttttatgcgtatatagcgcaa
acaaatgcggaagaaaaactggttgtctcttatgctttagctgatgaggaaggggcagcc
ttattaccttccccgctcattcgctatataaaagacacacttgattctgttccattcacc
tttgtccaaaatgaggccgatgcagttaatgagaatcattcgattgaatatgtatcacat
ccgaagcaagcttttatggaactcatccgtcagcttcaaaaatggaagcagggtgaaaca
attgattccatttggtgggacgtgtaccactggttcattcagcaggaacattggcagagt
cgtttgaaaatggggttgcaaagcctagattatgcatataaagaagtgccattgcccatc
gaaaaagcaagggacttatatggttcggagctcgtgatgagcgtaagtcgtatggaatta
tttaagcaatgttcgttccgacattttagtcaatatgggttgaaattaaaagaaagagat
gtttataaattagaagcatttgacatcggtgagttgtttcatatggtgctgaaattgatg
tccacaaagcaaaaggatcgtaataagacatggaagaagctatcgtacgacgagtgccgt
gagatgacaatagcggcagtggaagaagtcgctcctattattcaaaggaagattttacta
agtacaagtcattatcagtatattactgacaaattaaaagaaattgcgctaaacgtaaca
gaagcactacgtcagcaagcgttactctcgaagtttgagacaattgggctagaggttgcc
tttggtccacagacgaatttgtccctcccttcgtattcacttgaacacggtatgaatatg
accgtacgagggagaattgatcggattgatcaagcaaaagttgatggacaatcttactta
agtatcattgattataaatcaagtgcaacagcgcttgctttctctgacgtaatagaaggg
ctatccttgcaaatccctgtttatttaacggttgcattaaagggttccaaagcatggtta
gacgaaccgtcacaaattggcggcatgttctacttccatattcacaacccggtgctagaa
gatgcagaacacgcagaagaagaacgcctaaaagcatttaagttaagtgggtggatgcct
aaggatcgtcaactagcaacgctctttgatcagtcgctagaagaagcagcgaagtcgaaa
attgtgccagtagaatttaaaaaagatggcacctttcatagtcgctcaaaagtcgtaaca
gaggatgattttcgcacactctttgcatacacggaacaaaagattgttgaaattggcaat
gacattgttagtggaaaaacagaggtgaagccgtttcaacgtgagaatggtcatgtcgct
tgtagcttctgtccaatgcaagcagtttgtcaatttgacccgacgttacctggctatgac
tataacgaaatttataagaaagcgcatcgagatgcacttgaagagatgcgcgacattctt
ggtgaaggagagggtgaagatgcctaa
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