Shouchella hunanensis: PQ477_12140
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Entry
PQ477_12140 CDS
T09126
Symbol
addA
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
shua
Shouchella hunanensis
Brite
KEGG Orthology (KO) [BR:
shua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shua03400
]
PQ477_12140 (addA)
Enzymes [BR:
shua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PQ477_12140 (addA)
DNA repair and recombination proteins [BR:
shua03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
PQ477_12140 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
ResIII
AAA_12
AAA_14
BBS1
Motif
Other DBs
NCBI-ProteinID:
WDF02273
LinkDB
All DBs
Position
2392851..2396531
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AA seq
1226 aa
AA seq
DB search
MPKWTLQEKPADVSWTDEQWQAISLKGGNILVAAAAGSGKTAVLVERIVKRMIDPNDEAE
MDRLLVVTFTKAAAAEMKARIGKRIEEELSVRPSPYLKRQYRLLNRATISTLHSFCSELI
RAHYYEINVDPTIRLANDTERELLKEEVLETLLERYYALDKETMPDFYTMAEAYSGDRSD
TSLRALLLQLYTRSRSHPDPDRWLNESARMYEHPYDDVGESPWGKIILEEVFSFVSGAIA
NHTRALQLAERGDGPAFYHERLTEEVVALEGLTKCQSWDQLYQQLHDFTWKRLPSKKKDD
PTDPQLMERVKGLRDDSKKLVQKAQELLMTDAQENRLRLQQMQGRVRMLTTLVKEFAKAY
REEKAERSLMDFDDLEHFALDILSEESIAEPSAIALQYKARFQEVLTDEYQDTNQVQEAI
LQLVANGENRFMVGDVKQSIYRFRLAEPGLFIEKQTTYAKIERPLDKLKEAKGIRIDLAH
NFRSRKEVLDAVNYVFAQTMDKHVGEVEYDQTQALQYGNLDYGIEDEGYDVHVALLEKED
EDDASGFELSAEKEAKWTANKINELRASKYLVYDKRQNQMRPIEYRDITILMRSLPSSPV
FVDVFKRAGIPLFSDRDEGYFRHVEVQIMLSLLKIIDNPFQDIPLASVLRSPIVGLQDDE
LASIRLHDQEGFFYEAMQATLLNENQEGNWLEKLAHFNQQLQNWRTRARTTALSTFIWEL
FTETGYDVFVGGLPGGKQRQANVRALYDRAKAFEDTSFRGIFRFLRFVERMEEQGDDFES
ARTISEQENVVRLMSIHKSKGLEFPVVFVVDMWKQFNLMDTRRQTQIHQTLGFGSTYLDV
ERRVKYPTMAEAAIKKLQEREQISEELRVLYVALTRAKEKLFLLGSVKEREAKLEAWIEQ
AESSLSLHERKQARRFFDWIMPVVLRHEDVNRVSNKKEHPSKWTLDDMVEVPSLARTQPQ
STNTTVQLLQQLERLDGRTAGMECEVERRLAFNYIYPVATKTAAKQSVTELKRKTNWYSL
DEEMNTSRKNVMHSMKEPRFLKGDQKLSSTEKGSLMHRIMQRLSFQTKDPSHIKQEIEAI
SNRLALKKEERSAISYQRIIDFHQSSVGTRLLNSKKVKREVPFSYVQPKQQFSSQEEGAE
EDGVLIRGIIDVLWWDENGELFLLDYKTDRIQSSGLEKQEVEKVLKERYEHQIAQYKQAI
EAIWNVPVKECWLYFFDGGIDIQLFK
NT seq
3681 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaatggacgttacaagaaaagccagcagatgttagctggacggatgaacagtgg
caggcgatctctcttaaaggtggaaatattcttgtcgcagcagcagcaggtagtgggaag
actgctgttctagttgaacgaattgttaagcgaatgattgatccaaatgatgaagctgag
atggatcgattactagttgtaacatttacaaaagcagccgcagcagagatgaaggcacgt
attggtaaacggatagaagaggagttaagtgttcgtccttcaccttatttaaaacgccag
taccgtttattaaaccgagccacaatatccaccctacattccttttgttctgaactcatt
cgtgcccattattatgaaattaatgttgatccgacgattcgattggcaaatgatacggaa
agagaattgcttaaagaagaagtgctagaaacgttactagagcgttattacgccttggat
aaagagacaatgcccgacttctacacaatggcagaagcatatagtggagatcgctcagat
acaagtctaagagcgctccttttacaactatatacgcgttccaggtcccatcctgatcca
gataggtggcttaatgagagtgcgaggatgtatgaacatccgtatgacgatgtaggcgaa
agtccatgggggaaaatcattttagaagaagtgtttagctttgtgtcaggggccattgcc
aatcatacacgagctcttcaactcgctgagcgaggtgatggacctgctttttatcatgaa
cgactaacagaagaggttgtagcacttgaagggcttaccaagtgtcaatcttgggatcag
ttgtatcaacagctgcatgattttacttggaaacgtctacctagtaagaaaaaagatgat
ccaaccgatcctcaattaatggaacgagtaaaaggactacgggatgatagtaaaaaatta
gtgcaaaaagcccaagaacttttaatgactgatgcacaagagaaccggttgcgcctacaa
cagatgcaaggtcgtgtccgtatgttaacaacccttgtaaaagagttcgctaaagcgtac
cgagaagaaaaagcagaacgttcgttgatggattttgatgaccttgaacactttgctctc
gacattcttagtgaagaatcaattgcagaaccgtctgccattgcactgcaatacaaagcc
cggtttcaagaagtgttaacggatgaatatcaagacaccaatcaagtccaagaagcaatc
ttgcaattagtcgcaaatggcgagaaccgttttatggtaggagatgttaaacagagcatc
tatcgctttcggttggcggaaccgggtttgtttattgagaaacaaacaacgtatgcgaag
atagagcgccctctggataaactgaaagaagcaaaaggaattcggattgatttagcgcat
aactttcgtagccgtaaagaagtgcttgacgctgttaattacgtgtttgcacagacgatg
gacaagcatgtaggggaagtagagtatgatcaaacgcaagcgttgcaatacggtaacctt
gactatggaatagaagacgaaggttatgacgttcatgttgctttacttgaaaaagaggat
gaggacgacgccagtggttttgaattatccgcagaaaaagaagcgaaatggacagcgaat
aaaattaatgaattacgagcgagtaaatacctcgtttatgataaaaggcaaaaccaaatg
cgtccaattgaatatcgggacataacaattttaatgagatcccttccatcgtctcctgtt
tttgtggacgtatttaaaagagcgggtattccacttttttcagatcgagatgaaggctat
tttcggcatgtagaagtgcaaattatgctgtcattattgaaaattattgataatcctttt
caagatattccgttagcgtcggtactgcgttcaccaattgtcggactccaagatgatgag
ctagcaagtatacgcctacatgatcaagaagggttcttttatgaagccatgcaggccact
cttttaaatgaaaaccaagaaggaaattggttggagaagcttgctcattttaatcagcaa
cttcaaaattggcggacgagagcacgaacgactgcgttatctacatttatttgggaactg
tttacggaaactgggtacgatgtatttgtaggtggtttgcctggaggaaagcaacgacaa
gccaacgtgcgagccttgtacgatcgtgcaaaggcgtttgaagatacatcgtttcgcggc
atctttcggtttctgcgttttgttgagcggatggaagagcaaggagacgattttgagagt
gcacgtaccattagtgagcaagagaatgttgttcgcttaatgtcgatccataaaagtaaa
gggctcgaatttccagtagtcttcgtagtagatatgtggaagcaatttaacttaatggat
acgagacgacaaacccaaattcaccaaacattaggatttggctcgacctacttagatgta
gaacgacgtgtgaagtaccctacaatggcagaggcggcaataaagaaattgcaagaaaga
gagcaaatatcggaagaacttcgtgtgctgtatgtagctctaacgagagcgaaggaaaag
ctgttcctactaggaagtgttaaagaaagagaagcaaagttggaagcatggatagaacag
gcggagtcttctctttcactacatgagcgcaagcaggctcgtcggttctttgactggatc
atgcctgttgttctccgacatgaagatgtgaatcgtgtttctaacaagaaggagcatccg
tcaaagtggacgctcgatgatatggtggaagtaccttcattagcacgtactcaacctcag
tcaacaaatacaacagttcaattgctacagcaattagaacgattagatggacgaactgct
ggaatggagtgtgaagtggagcgtcgacttgctttcaattatatatatcctgtagctacc
aaaacagcggcgaaacaaagcgtgaccgaattaaaacgaaaaaccaactggtattctctt
gatgaggaaatgaatacgtctcggaaaaacgtcatgcattcgatgaaggagccacgtttt
ttaaaaggggatcagaagctaagttctactgaaaaaggatcgcttatgcatcgtattatg
cagaggctatcatttcagacaaaggatccgtctcatattaagcaagagattgaagccatt
tcaaatcggcttgcgttgaaaaaagaagaaagaagcgccatctcataccaacgcattatt
gattttcatcaatcatcagtgggaactcgtttactcaattcgaaaaaagtgaaaagagag
gtgcctttttcctatgttcaacctaagcagcaattctcctctcaagaagagggagcagaa
gaagacggcgtgttaattcgaggaattattgacgtgttatggtgggatgagaacggtgag
ttgtttttacttgattataaaaccgatcgcattcaatcttctggcttagagaaacaagag
gtcgaaaaggtcttgaaggaacgttatgagcaccaaatcgcgcaatacaagcaagcaatt
gaagccatttggaatgtaccggtaaaggaatgctggctgtatttctttgatggcggtatc
gacattcaactattcaaataa
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