Shouchella hunanensis: PQ477_15495
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Entry
PQ477_15495 CDS
T09126
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
shua
Shouchella hunanensis
Pathway
shua03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PQ477_15495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shua03400
]
PQ477_15495
Enzymes [BR:
shua01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
PQ477_15495
DNA repair and recombination proteins [BR:
shua03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PQ477_15495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
AAA_11
Viral_helicase1
AAA_22
AAA
UvrD-helicase
AAA_16
UvrD_C
nSTAND3
NTPase_1
T2SSE
AAA_28
NPHP3_N
Fe_dep_repress
HHH_5
TsaE
Rad17
NB-ARC
AAA_18
AAA_25
Motif
Other DBs
NCBI-ProteinID:
WDF02892
LinkDB
All DBs
Position
3040184..3042442
Genome browser
AA seq
752 aa
AA seq
DB search
MDVEETGRYIKGKVTHVLFRNAENDYTVATVKIDKTNEQIEAKKTTIVGHLPELEMDETY
SFFGQVTEHPKFGTQYKVETFKREMPKTKNGIIKFLSSDRFPGIGTKTAETIVNELGERA
ISLIIEDQHVLDRVPKLKKENAMMLHQRLLEHQGAEQVIIQLSQYGFGTELSMNVYRAYK
LQALDIIRTNPYLLIKDVEGVGFRRADQLGAAIGLTGDHPERVRAGILYLINELSIQDGH
LFLYTDSFVQEVVLLLHTPTKPVSGETVQQIIKEMNEDGLVVTEHDRIYMKSLFYAERGI
AQNIMRIKSYELKSEFTQADMEKTLGELEENHNVTYSPLQKEAIEKALHSPIMLLTGGPG
TGKTTVIKGIVESYARLQGVNLDGQGNGEKDNRSLPIKLAAPTGRAAKRMAEATELAAGT
IHSLLGWKGSTTGFDKGDHDQLEGELLIVDEMSMVDAWVANQLFKAIPKGMQVILVGDEN
QLPSVGPGQVLKDLLDANVIPTVQLSEIYRQAEGSSIIELAHSMKDGHLPTDLTAKKPDL
RFFSCHTHQVKQAVWQICENALTKGYSPREIQVLAPIYRGGAGIIELNTMLQTLFNPAKE
GRRELPFGDVIFRKGDMVLQLVNNAEENVFNGDRGEIVAVLYAKETTEKKDQLVVSFDGL
EVTYEKKDFTQLTHAYCSSIHKAQGSEFPIVVMPVVGNYQRMLRRNLLYTGITRAKQFLL
LCGDINTFEQAIQKSNDGRQSLLKDRLQERMM
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atggatgttgaagaaacaggaagatacattaaaggaaaagtgacacacgtgctattccgt
aatgctgaaaatgattatacggttgctactgttaaaattgataaaacgaatgaacaaatt
gaagcgaagaaaacaacaatagtcggtcaccttccagagcttgagatggacgaaacgtat
tcgttttttggacaggttaccgaacacccaaagtttggtacacaatataaagttgagaca
tttaaaagggaaatgcctaaaacgaaaaatggtattattaaatttctttcaagtgatcgt
tttcctggtattggaacgaaaacagccgaaacgattgttaatgaactaggtgaacgcgca
atttcgcttattattgaagatcagcatgttcttgatcgagtgccaaagttgaaaaaagag
aatgctatgatgcttcatcaacgtttattagaacatcaaggagccgaacaagttattatt
cagttatctcaatatggctttgggacagagctatcaatgaatgtgtatcgcgcgtataaa
cttcaagcacttgatattattcgtactaatccatatttattaataaaagacgtagaagga
gttggttttcgccgcgccgatcagcttggggcagccattggcttaactggggatcatccg
gaacgcgtgcgtgcgggcatcttatatttaattaatgaattaagtattcaagatgggcac
ctttttctttatacggactcgtttgttcaagaggttgtgctattgttacatacgccaact
aagcctgtaagtggtgagaccgttcaacaaatcatcaaagaaatgaatgaagatggtctt
gttgtaacagagcatgaccgtatttatatgaaatcccttttttatgcggagcgaggaatc
gcgcaaaatattatgcggattaaatcctatgagcttaaatctgaatttacgcaagcagat
atggaaaaaacccttggtgagctggaagaaaatcataatgtaacgtattctcctttacaa
aaagaagcaatagaaaaggcacttcattcacctatcatgctgttgactggaggcccaggt
acagggaaaaccaccgttataaaaggaattgtagaatcttatgcacgtttacaaggtgtg
aatcttgatgggcaaggaaatggtgaaaaagacaatcggtctttgccaatcaagctagct
gcgcctacggggcgtgcagcgaaacgaatggctgaagcaaccgagctagctgctggtaca
attcatagcttacttggctggaaaggaagcactacaggttttgataaaggagatcacgat
cagctcgaaggtgaactgttaattgtagatgaaatgtccatggttgatgcatgggtggcc
aatcagttgtttaaagcgattccaaaagggatgcaagtcattcttgtcggtgatgaaaat
caattaccatctgttggtccaggacaagtactaaaagatttgcttgatgcgaatgttatt
cccaccgttcagttaagcgaaatttatcgacaggccgaaggttcatccattattgagcta
gctcattccatgaaagatggtcatttgccaactgatcttaccgcaaaaaaacctgattta
cgcttcttctcctgtcacacccatcaagtgaagcaagctgtttggcaaatatgtgaaaat
gcactaacaaaaggctatagtcccagggaaattcaagtattagctccgatctatcggggt
ggagctggcattattgagttaaatacaatgttgcaaacactctttaatccagctaaagaa
ggccggagagaactacctttcggtgatgttatttttcgtaaaggtgacatggtgcttcaa
cttgtgaataatgcagaagaaaacgtctttaatggagacagaggagaaattgtagctgtc
ctttatgccaaagaaacgacggagaaaaaagaccagctcgttgtatcattcgatggatta
gaagtgacgtacgagaaaaaagacttcactcaattaacccatgcctattgttcttctatt
cataaagctcaagggagtgaatttcctattgtcgtcatgccggtcgttgggaattatcaa
cgcatgctacgacggaatttgttatacacggggattacaagagcaaagcagttcttactt
ttatgcggtgatataaatacatttgaacaagcgattcaaaaaagtaatgacggcaggcaa
tcattattaaaagaccgacttcaagaacgaatgatgtag
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