Shouchella hunanensis: PQ477_15990
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Entry
PQ477_15990 CDS
T09126
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
shua
Shouchella hunanensis
Brite
KEGG Orthology (KO) [BR:
shua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shua03032
]
PQ477_15990
03036 Chromosome and associated proteins [BR:
shua03036
]
PQ477_15990
03400 DNA repair and recombination proteins [BR:
shua03400
]
PQ477_15990
DNA replication proteins [BR:
shua03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PQ477_15990
Chromosome and associated proteins [BR:
shua03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
PQ477_15990
DNA repair and recombination proteins [BR:
shua03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
PQ477_15990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-DNA_bdg
DUF2267
Motif
Other DBs
NCBI-ProteinID:
WDF02985
LinkDB
All DBs
Position
complement(3113764..3114039)
Genome browser
AA seq
91 aa
AA seq
DB search
MNKTDLINAVSEQAEISKKDASKAVDAVFEGITDSLVNGGKVQLVGFGSFEVRERSARKG
RNPQTGEEIEIPATKNPAFKPGKQLKDAVNS
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaacagatctgattaatgcagtttccgaacaagcagaaatctctaaaaaggat
gcgtcaaaagcagtagacgctgtatttgaaggcatcactgattcattagtgaacggaggc
aaagttcaacttgttggctttggtagctttgaagtaagagagcgttctgcaagaaaagga
cgtaacccacaaactggagaagaaattgaaattccagcaactaaaaatcctgcgttcaaa
ccaggtaaacaacttaaagacgcagttaattcataa
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