Shouchella hunanensis: PQ477_19230
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Entry
PQ477_19230 CDS
T09126
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
shua
Shouchella hunanensis
Pathway
shua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
shua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PQ477_19230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shua03019
]
PQ477_19230
03400 DNA repair and recombination proteins [BR:
shua03400
]
PQ477_19230
Enzymes [BR:
shua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PQ477_19230
Messenger RNA biogenesis [BR:
shua03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PQ477_19230
DNA repair and recombination proteins [BR:
shua03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PQ477_19230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
WDF03597
LinkDB
All DBs
Position
complement(3751944..3753458)
Genome browser
AA seq
504 aa
AA seq
DB search
MLERELQRLFGFQTFKEGQKDIIEALMAGNDVFAMLPTGRGKSLCYQLPAFLARGLTVVV
SPLLSLMEDQVAQLKKAGRKQVVALNSFSSKQERQKLLQQLNDYKIVYLSPEMLQAQDVL
SALRSQLISYFIIDEAHCISYWGHDFRADYLRLREVKAALDHPPTLAITATADENVRKDI
KIQLQLRQPVEILDRVNRENIALFVERYETNEQKVIRLKEIVREYELPGLVYAQTRAQAE
WYCEQLQRDCPELSVGYYHGGMDSMDRMLVQEQFLSNQLDLICATNAFGMGVNKQDIRFI
IHLQQPLDVASYLQEIGRAGRDGSPSFALVLLSPEDPFYASRLIQNRVEETMSLETLPQL
LAMPFNSKSEQRMRLEQSYGEQGQTILFLLEKWDVIVDDKGTWKNQHETISKLKTYFEKQ
EQRRQHRLDTMTEYSENHNQCRRHLLLHPFDEHVRLQAICCDICGATLDSFQKQKHESTK
DIFQWDEELANIFNQPYLERGAKR
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgttagagcgtgaattacaacgattgtttggttttcagacatttaaggaagggcaaaaa
gacataattgaagcgctaatggcgggtaatgatgtgtttgccatgttacctactggaaga
ggaaagtctttatgctaccaactccctgcttttttagcgagaggattaacggttgttgtt
tcaccactactttctcttatggaggatcaagtagcacaattaaaaaaagcaggtcgaaaa
caagttgtagcacttaatagtttttcttcaaaacaagagcggcaaaagcttcttcagcag
ctaaatgactataaaattgtttatttatcaccagaaatgcttcaagcacaagatgtactc
agcgctttaagaagtcagcttatatcgtattttattatcgatgaggcgcactgtatttcc
tactgggggcatgattttcgcgctgattatttgcgattaagagaagtgaaggcggctctc
gatcatccacctactttagccattacagctaccgctgatgaaaacgttcgaaaagatata
aaaatacagcttcaattacgtcagccagttgaaatccttgatcgagtgaatcgggaaaat
atcgctcttttcgttgaaaggtatgaaacgaatgaacaaaaagtcattcgtcttaaagag
attgttcgagagtacgagctccctggtttagtatacgcgcaaacaagggcacaagcggag
tggtactgtgaacaacttcaacgagattgtccagagctttcggtaggctactaccacggt
ggaatggatagcatggatcgaatgctcgttcaggagcaatttctttcaaatcagttagat
ttaatttgtgcaacaaatgcctttggaatgggtgtgaataaacaagatattcgctttatt
attcatttacagcaacccctggatgttgcatcttatttacaagaaattggccgagctggt
cgagacggttcaccaagtttcgctctcgttcttctttctcctgaagatccattttatgca
tctcgactcattcaaaatcgagtcgaagagacaatgtcgttagagacattgccccagctg
cttgcgatgccttttaacagtaaaagtgaacagcgaatgaggcttgagcaatcatacggt
gagcaaggtcaaacgattttatttttacttgaaaaatgggacgtaatcgtagatgataaa
ggaacatggaagaatcaacatgaaaccatttcaaaattaaaaacgtattttgaaaaacaa
gaacaacgaaggcaacatcgacttgacactatgactgagtatagtgaaaatcacaaccag
tgcagacgccatttattgcttcatccctttgatgagcatgtgaggctgcaggccatttgt
tgtgacatctgcggagcaactctcgattcatttcaaaaacaaaaacacgaatcaactaag
gatatctttcaatgggatgaagagcttgccaacatctttaatcaaccgtatttagaaagg
ggggcaaagagatga
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