Shouchella hunanensis: PQ477_20410
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Entry
PQ477_20410 CDS
T09126
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
shua
Shouchella hunanensis
Pathway
shua03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PQ477_20410 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shua03400
]
PQ477_20410 (priA)
Enzymes [BR:
shua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PQ477_20410 (priA)
DNA repair and recombination proteins [BR:
shua03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PQ477_20410 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
ATPase_2
AAA_16
ADDB_N
RecA
Zn_ribbon_6
nSTAND3
UvrD-helicase
Rtt106_N
Motif
Other DBs
NCBI-ProteinID:
WDF03822
LinkDB
All DBs
Position
complement(3977350..3979752)
Genome browser
AA seq
800 aa
AA seq
DB search
MIARIIVDVPTAQTDRLFDYKIPSEWETLVQPGIRVVVPFGPRKIQGFVIERTETSDVKN
MKAIIEVLDPVPVLSEELLALGKWLAKATICFQVTAFQAMLPAALKTKVSKIIQMRVERT
ELPEQIRTLFGNGNHLNWDELKKGEPSDLLTMKKALEAGLVEIEYATKAHTKMKTERFVT
VSDVRESELESLQRKAKKQYELIQFLKGKQRPLPSQQAIAETKSSRATLKALLDKGFVQE
WAQEVYRDPTSNDTFTRSEPLVLTPKQQEALQVISRPIEEDRYETVLLHGVTGSGKTEIY
LQAIAKVLQKGQEAIMLVPEISLTPQMVNRFKARFGNLVAIMHSGLSNGEKYDEWRKIHR
KEVSVVVGARSAVFAPFTNLGLLIIDEEHESSYKQEEAPRYHTRDVAKYRGANHRAPVLL
GSATPSVETFARAKKGNYTLVSLQERVNARPMPEVEIVDMREELRNGNRSMFSRALLQGL
RERLDRKEQTVLFLNRRGYSTFVMCRDCGYVATCDYCDISYTYHRKGHSLKCHYCGDEKP
MPTTCTECGSEHIRFFGSGTQKVEEELYKYFPEANVIRMDVDTTRKKGSHKTLLDAFGQG
KGDILLGTQMIAKGLDFPNITLVGVLAADSMLHIPDFRSAERTFQVLEQVAGRAGRAELT
GEVIVQSYTPEHYSIQLVKQHDYEQFFASEMRIRKQGGYPPYYYMALLTISDQDLATVIK
TSGKIADYLKRTLSEETVILGPVVSPIARIKDRYRYQCVIKYKHEPKLYETLETVLHHYQ
RDTTTKRLSISMDVHPYFFM
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
gtgattgcgcgcattatcgtagacgtacctactgcacagacagatcgactctttgattat
aagattccaagcgaatgggagacgcttgttcagccaggtattcgggtcgtcgtaccattt
ggaccgcgaaaaattcaaggttttgtgattgagcgaaccgaaacaagtgacgtcaagaat
atgaaagctattattgaagtacttgatcctgtaccggttttaagcgaagaattgttagcc
cttggcaaatggttagcaaaggcaacgatttgctttcaagttactgcctttcaagcgatg
ttaccggcggcattaaagacaaaagtttctaagatcattcaaatgagggtcgaaagaaca
gagctgcccgagcagatacgtaccctatttggcaatggaaatcatttgaattgggatgaa
ctaaaaaaaggggaacctagcgatcttctcacaatgaaaaaggctcttgaagcaggcctt
gttgaaattgaatatgcaacaaaggctcatacaaaaatgaaaacagaacggtttgttaca
gttagcgatgtacgcgaatcagagctagaatccttacagcgaaaagcaaagaaacagtat
gaactgattcaattcttgaaagggaagcagcgacctttaccgtcacagcaagctatagct
gaaacgaaatcgagtcgtgcaaccctaaaagctttacttgataaagggtttgttcaggaa
tgggcacaagaagtgtaccgagatccgacaagcaatgatacatttacaaggtctgagccg
cttgtattaacaccaaagcaacaagaggcactccaagttatttctcgtcccattgaggaa
gaccggtatgaaacggtgctactacacggtgttacaggaagcggtaaaacggaaatctat
ttacaagccattgctaaagtacttcaaaaaggccaagaagccatcatgcttgttccggaa
atctctcttaccccacaaatggtgaatcgctttaaagctcgattcggcaatttagtagct
attatgcactctggtttatccaatggagaaaaatacgacgagtggcgaaagatccaccga
aaagaagttagtgttgttgtaggtgctcgttctgctgtatttgcaccatttacaaacctc
ggtttacttattattgatgaagagcatgaatcaagttacaaacaagaagaagcaccacgt
taccacacaagagatgttgcgaaataccgtggagcgaaccatcgagcgccagtcttatta
ggaagtgcgaccccatcagttgaaacgtttgcccgtgcaaagaaaggcaactatacgttg
gtttcattgcaagaacgagtaaatgcgcggccgatgcctgaagtagaaattgtggacatg
cgtgaggagcttcgcaatggcaatcgttcaatgttctctagagcgttgcttcaagggctt
agggagcggttggatcgaaaagagcaaacggtgctatttttaaatcgtcgtggttattca
acatttgttatgtgtagagattgtgggtatgtggcaacatgtgattattgtgatatctct
tacacctaccatcgtaaagggcattcattaaaatgccattactgtggcgacgagaaacca
atgccaacgacgtgcacggagtgtggaagcgagcacattcgattcttcggctcaggcacg
caaaaagtggaagaagagctgtataaatattttccagaagcgaacgttattcgaatggat
gtcgacacaactagaaagaaaggctctcataagacattactcgatgcttttggacaaggc
aaaggtgatattttacttggtacccaaatgattgcaaaagggcttgattttccaaacatt
acgttagtcggcgtcctcgctgcagattctatgctgcatattcctgattttcgaagcgca
gagcggacgtttcaagtgctagaacaagttgcaggtcgagcgggacgagcagaattaaca
ggagaagtgattgttcaatcatacacgccagaacattacagcattcagcttgttaagcaa
catgattatgagcaatttttcgcaagtgaaatgagaattcgtaagcaaggtggctatcca
ccatattattatatggctcttctcaccatttccgatcaagacctggcaacagtaataaaa
acgtccggaaaaatagcggattacttaaagcgtaccttaagcgaagaaacggttattctt
ggtcctgttgtctcgcctattgcccgtatcaaagatagatatcgctatcaatgcgtgata
aaatataagcatgagccgaaattatatgagacgttagaaaccgtattgcatcactaccaa
cgggatacaacaacgaaacggttatcgattagtatggatgtccatccgtacttttttatg
taa
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