Shouchella hunanensis: PQ477_20605
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Entry
PQ477_20605 CDS
T09126
Name
(GenBank) stage V sporulation protein D
KO
K08384
stage V sporulation protein D (sporulation-specific penicillin-binding protein)
Organism
shua
Shouchella hunanensis
Pathway
shua00550
Peptidoglycan biosynthesis
shua01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
shua00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PQ477_20605
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
shua01011
]
PQ477_20605
Peptidoglycan biosynthesis and degradation proteins [BR:
shua01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
PQ477_20605
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PASTA
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
WDF03859
LinkDB
All DBs
Position
complement(4018978..4020912)
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AA seq
644 aa
AA seq
DB search
MRVSNVTVRKRLLLLFAVGIVVFTVIGARLGYVQFGQGLWLTEKAEDSWGRDIPFEPKRG
DILDRNGVELATNISTPSIIVFPRQIKDPADAAERLASVLKANKNEVYEDLTKKESKVYI
RPEGQKMDQQTAQEVRSLNIEGIYIAEDSKRHYPFGSYLSHVLGFAGIDNQGLTGLEFVY
DEKLKGTEGYVSFYSTAKNTKMPNLADEYTAPINGLNLKLTIDSRVQTIVERELDIAEAK
YNPDGAIAIAMNPKNGEILAMSSRPHFNPENYRDVPAEIYNQNKPVWMQYEPGSTFKLIT
LAAALEEDVVDLDNDHFYDPGYIDVAGTKLHCWKRGGHGSQTFLEVVQNSCNPGFVELGQ
RLGTDRLFDYIEDFGFGQKTGVDLQGEAKGILFNRERVGPLEQATTAFGQGVAVTPIQQV
AAVAAAVNGGYLYEPYIAKEWVDDVTGEVVERSNPVMKRQVVSPETSEKVRYAMENVVAK
GSGGKAFVDGYRVGGKTGTAQKAKDGRYLENNYILSFLGVAPMDDPEIIVYVAIDNAKGA
VQYGGQVSAPIAGKIIGDSLEAMGVEKRKDQIEKELKWDEEGLVDVPNLLGRTKRDIYES
HYELRLSASGEGEVVARQAPEPGTRVPKDSTIRVYMGDKTNEND
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcgtttcaaatgtaacagtcagaaaacggctgctattgctatttgctgtaggaatt
gtcgtgtttacagtcattggagcacgtttagggtatgttcagttcggacaaggtttgtgg
cttacagaaaaagcagaagattcttggggacgagatatcccgtttgaacctaagcgaggc
gatatactagaccggaatggcgtcgagttagcaacgaatattagtacaccttctattatt
gttttcccaaggcaaataaaagatccagcagatgcagcagaaagattagcatctgtgtta
aaagcgaataagaacgaggtatacgaagatttaacaaaaaaagaaagtaaagtgtacatt
cgcccagaaggtcagaaaatggaccaacaaacggcgcaagaggtgcgaagtttaaatata
gaaggcatttatatagcagaggactccaagcgtcactatccctttggtagttatctatct
catgtacttggatttgcagggatcgataatcaaggtctaacaggtttagaatttgtctac
gatgaaaagttaaaaggaacagaagggtatgtgtcgttttattctactgccaaaaatacg
aaaatgccgaatttggctgatgaatatacagctccaattaatggcttaaatttaaaatta
actattgatagtcgtgttcaaacgattgtggaacgggaattagatattgcagaagccaag
tataatccagatggagcgattgcaatcgcgatgaatccgaaaaatggtgaaattctagca
atgagcagccgaccgcactttaaccctgaaaactatcgggatgttccagctgaaatatac
aatcaaaacaagcctgtctggatgcagtatgaacctggttcgacttttaaattaattacc
cttgcagctgctttagaagaagatgtcgttgatttagacaatgatcatttctatgaccct
ggctacatagatgtagctggtacaaagctccactgttggaaacgaggtggacacggctca
caaacctttttagaggttgtgcaaaattcatgcaaccctgggtttgttgaactcggtcaa
cgcttaggtactgatcggttgtttgattatattgaagactttgggttcggtcaaaaaacc
ggtgttgatttacaaggtgaagcgaaaggcattttgtttaatcgtgaacgtgtaggtccg
ttagagcaagcaacaacggcctttggtcaaggggttgcagtcacgcctattcaacaagta
gcggcagtcgccgcagcggtcaatggtggctatttgtacgaaccttatattgcaaaagag
tgggtagacgatgtaactggtgaagtggttgaacgaagcaatccagtgatgaaacgccaa
gtcgtttcacctgaaacatctgaaaaagttcgctatgcgatggaaaacgtagtcgctaaa
ggttcaggtggaaaagcatttgtcgacggttaccgagttggcggaaagacaggaactgcg
caaaaagcaaaagacggtcgctatttagagaacaactatatcctgtcttttcttggtgta
gcgccaatggatgacccagaaattattgtgtatgtggcaattgataacgcgaaaggagcc
gttcaatacggggggcaagtttccgctcctattgcagggaaaattatcggggatagctta
gaagcgatgggtgttgagaaaaggaaagatcaaattgaaaaagagcttaaatgggatgaa
gaagggttagtagacgttcctaatttattaggacgaacgaagagagacatttatgagtct
cattatgaattgcgcctctcggcctctggtgaaggggaggttgtcgctcggcaagcgcct
gaaccaggtacgagggttccaaaagattcaacaatccgtgtatatatgggtgacaaaacg
aatgagaacgactaa
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