Streptomyces huangiella: ABVG11_05725
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Entry
ABVG11_05725 CDS
T11406
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
shug Streptomyces huangiella
Pathway
shug03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
shug00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
ABVG11_05725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shug03400
]
ABVG11_05725
DNA repair and recombination proteins [BR:
shug03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
ABVG11_05725
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
XUZ85643
LinkDB
All DBs
Position
complement(1324379..1325329)
Genome browser
AA seq
316 aa
AA seq
DB search
MRPVWSGAVSFGLVTIPIKVLPATEDHSVSFRQIHTTDGGRIRYRKVCELDEKVLEQDEI
GRAYEESKDHLVPIADEELDQLPLPTAKAIDVQAFVPAETLDPIRFGRPYYLQGDGAVAA
KPYTLLREALERSANVAIAKFAWHGRERLGALRVVGDAIVLQALHWPDEIRSSEGLAPTG
VELSDSEVDEAITLMDAIGGADVSQYRDQYREAVEAVVQAKAAGVEPPETEAPAEAGGKV
VDLMAALKDSVREARKARGEAPDETAGEGEVHEMPSKPPKKKATGKKAAAKAAAKTAAKT
AKKAPAKKTARKRTAS
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgcgccccgtgtggtccggtgccgtgtcgttcgggctcgtcacgattccgatcaaggtg
ttgcccgccaccgaggaccactcggtgtccttccggcagatccataccaccgacggcggc
cggatccggtaccgcaaggtctgcgagctggatgagaaggtcctggaacaggacgagatc
ggccgggcctacgaggagagcaaggaccatctcgtgccgatcgcggacgaggagctggac
cagctgccgctgccgaccgcgaaggcgatcgacgtccaggccttcgtccccgcggagaca
ctggatccgatccgcttcggacgcccctactaccttcagggtgacggggccgtcgccgcc
aagccgtacaccctgctgagggaggccctggagcgcagcgccaacgtggccatcgcgaag
ttcgcctggcacggccgtgagcggctcggcgcgctgcgggtggtgggcgacgccatcgtg
ctccaggcgctgcactggccggatgagatccgctccagcgagggactcgcgccgacgggt
gtggagctctccgactccgaggtcgacgaggccatcaccctgatggacgccatcggggga
gccgatgtcagtcagtaccgcgaccagtaccgggaagccgtcgaggccgtggtccaggcg
aaagcggccggagtggagcccccggagacggaggcaccggccgaggccggggggaaggtc
gtggatctcatggccgccctgaaggacagcgtgcgcgaggccaggaaggcgcgcggtgag
gccccggacgagaccgcgggcgagggcgaggtgcatgagatgccgtcgaagccgccgaag
aagaaggcgacgggcaagaaggccgccgcgaaggccgccgcgaagaccgccgcgaagacc
gccaagaaggctccggcgaagaagacggccaggaagcggaccgcgtcctga
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