Streptomyces huangiella: ABVG11_15300
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Entry
ABVG11_15300 CDS
T11406
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
shug Streptomyces huangiella
Pathway
shug03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
shug00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
ABVG11_15300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shug03400
]
ABVG11_15300
DNA repair and recombination proteins [BR:
shug03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
ABVG11_15300
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
XUZ87397
LinkDB
All DBs
Position
3499302..3500414
Genome browser
AA seq
370 aa
AA seq
DB search
MRSIWNGNISFGLVSIPIKMYPATEDHSVSFRQIHTADGGRIRYRKICELEEKQVETGEI
GRAYEDADGALIPVTDEDLAALPLPTTRSLEIEAFVSAAEIDPLQMGDAYYLGVNGTAAA
KPYALLREALRRSEKVAIAKYVHRGRERLGMLRVVGDALAMHRLLWPDEVRDATGVAPKE
KVKVRPAELDLADTLMATLGEVDLSELHDEYHEALEALVAAKVSGTAPVAGPGEEPGGAQ
VVDLMAALQDSVRSARQARGEAAGGAGGEEKATVTELRGRKKAAAKKAPAAKRGASSTGG
RTATAKKTATGTTQQKAEKKTGSKKAAARTAAKAPAGKSAKKTTAKTATKSAAKTAAKKT
GAKRGPRAAS
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgcgatctatctggaatgggaatatttccttcggtctggtgagcatcccgatcaagatg
tacccggcgaccgaggaccactccgtctcgttccggcagatccacaccgccgacggcggc
cgcatccggtaccgcaagatctgtgagctggaggagaagcaggtcgagacgggcgagatc
ggacgggcctacgaggacgccgacggtgcgctgatcccggtcaccgacgaggatctggca
gcccttccgctgcccaccacccgctcgctggagatcgaggcgttcgtctccgccgcggag
atcgatccgctgcaaatgggtgacgcctactacctgggggtcaacggcacggccgcggcc
aagccgtacgcactgctgcgggaggcgctcaggcgcagcgagaaggtggccatcgccaag
tacgtgcaccgcgggcgggagcggctggggatgctgcgggtggtgggtgacgccctcgcg
atgcaccggctgctgtggccggacgaggtacgggacgccacaggggtggcgcccaaggag
aaggtgaaggtgagacccgccgaactggacctggccgacaccctgatggcgacgctcggc
gaggtggatctgagcgagctgcacgacgagtaccacgaggcgctggaagccctggtggcg
gcgaaggtctccgggaccgcgcccgtcgccggacccggtgaggagcccgggggcgcgcag
gtcgtcgatctgatggcggctctgcaggacagcgtccgcagcgcccggcaggcgcggggc
gaggcggccggaggagccggaggagaggagaaggcgaccgtcaccgagctgcgcggacgc
aagaaggcggcggcgaagaaggcccccgcggccaagcggggcgcctcctcgacgggcggc
aggacggcgacggcgaagaagacggccacggggacgacacagcagaaggcggagaagaag
acgggttcgaaaaaagccgcggccagaacggcggcgaaggcaccggccgggaagtcggcg
aagaagacgactgccaagaccgccacgaagtccgccgccaagaccgccgcgaagaagacc
ggggccaagcggggcccccgggccgcgtcctga
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