KEGG   Streptomyces huangiella: ABVG11_15300
Entry
ABVG11_15300      CDS       T11406                                 
Name
(GenBank) Ku protein
  KO
K10979  DNA end-binding protein Ku
Organism
shug  Streptomyces huangiella
Pathway
shug03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:shug00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    ABVG11_15300
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:shug03400]
    ABVG11_15300
DNA repair and recombination proteins [BR:shug03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     ABVG11_15300
SSDB
Motif
Pfam: Ku
Other DBs
NCBI-ProteinID: XUZ87397
LinkDB
Position
3499302..3500414
AA seq 370 aa
MRSIWNGNISFGLVSIPIKMYPATEDHSVSFRQIHTADGGRIRYRKICELEEKQVETGEI
GRAYEDADGALIPVTDEDLAALPLPTTRSLEIEAFVSAAEIDPLQMGDAYYLGVNGTAAA
KPYALLREALRRSEKVAIAKYVHRGRERLGMLRVVGDALAMHRLLWPDEVRDATGVAPKE
KVKVRPAELDLADTLMATLGEVDLSELHDEYHEALEALVAAKVSGTAPVAGPGEEPGGAQ
VVDLMAALQDSVRSARQARGEAAGGAGGEEKATVTELRGRKKAAAKKAPAAKRGASSTGG
RTATAKKTATGTTQQKAEKKTGSKKAAARTAAKAPAGKSAKKTTAKTATKSAAKTAAKKT
GAKRGPRAAS
NT seq 1113 nt   +upstreamnt  +downstreamnt
atgcgatctatctggaatgggaatatttccttcggtctggtgagcatcccgatcaagatg
tacccggcgaccgaggaccactccgtctcgttccggcagatccacaccgccgacggcggc
cgcatccggtaccgcaagatctgtgagctggaggagaagcaggtcgagacgggcgagatc
ggacgggcctacgaggacgccgacggtgcgctgatcccggtcaccgacgaggatctggca
gcccttccgctgcccaccacccgctcgctggagatcgaggcgttcgtctccgccgcggag
atcgatccgctgcaaatgggtgacgcctactacctgggggtcaacggcacggccgcggcc
aagccgtacgcactgctgcgggaggcgctcaggcgcagcgagaaggtggccatcgccaag
tacgtgcaccgcgggcgggagcggctggggatgctgcgggtggtgggtgacgccctcgcg
atgcaccggctgctgtggccggacgaggtacgggacgccacaggggtggcgcccaaggag
aaggtgaaggtgagacccgccgaactggacctggccgacaccctgatggcgacgctcggc
gaggtggatctgagcgagctgcacgacgagtaccacgaggcgctggaagccctggtggcg
gcgaaggtctccgggaccgcgcccgtcgccggacccggtgaggagcccgggggcgcgcag
gtcgtcgatctgatggcggctctgcaggacagcgtccgcagcgcccggcaggcgcggggc
gaggcggccggaggagccggaggagaggagaaggcgaccgtcaccgagctgcgcggacgc
aagaaggcggcggcgaagaaggcccccgcggccaagcggggcgcctcctcgacgggcggc
aggacggcgacggcgaagaagacggccacggggacgacacagcagaaggcggagaagaag
acgggttcgaaaaaagccgcggccagaacggcggcgaaggcaccggccgggaagtcggcg
aagaagacgactgccaagaccgccacgaagtccgccgccaagaccgccgcgaagaagacc
ggggccaagcggggcccccgggccgcgtcctga

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