Streptomyces huangiella: ABVG11_16715
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Entry
ABVG11_16715 CDS
T11406
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
shug Streptomyces huangiella
Brite
KEGG Orthology (KO) [BR:
shug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shug03016
]
ABVG11_16715
Enzymes [BR:
shug01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
ABVG11_16715
Transfer RNA biogenesis [BR:
shug03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
ABVG11_16715
Prokaryotic type
tRNA splicing ligases
ABVG11_16715
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GFIT
Other DBs
NCBI-ProteinID:
XUZ87661
LinkDB
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Position
complement(3801827..3803020)
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AA seq
397 aa
AA seq
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MSYVEVPGANVPIRMWTDPTTVEDVAMQQLRNVATLPWIKGLAVMPDVHYGKGATVGSVI
AMRGAVCPAAVGVDIGCGMSAVKTSLTANDLPGDLSRLRSKIEQAIPVGRGMHDDPVDPG
RLHGFPTATWDDFWGRFDGVAEAVKFRQGRATKQMGSLGSGNHFIEFCLDDEGSVWLMLH
SGSRNIGKELAEYHIGEARKLPHNQNLVDRDLAVFIADTPQMAAYRHDLFWAQEYAKYNR
SIMMALFQDVVRREFKKAKPVFEPVISCHHNYVAEERYEGVDLLVTRKGAIRAGSGDYGI
IPGSMGTGSYIVRGLGNAHSFNSASHGAGRRMSRNAAKKRFSTRDLEEQTRGVECRKDSG
VVDEIPGAYKPIEKVIDQQRDLVEVVARLKQVVCVKG
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtacgtcgaggtacccggggcgaacgtcccgatccgtatgtggacggatcccacg
acggtcgaggacgtcgccatgcagcagctccgcaacgtcgccaccctgccgtggatcaag
ggcctggccgtgatgcccgatgtgcactacggcaagggcgccacggtcggctcggtgatc
gcgatgcggggcgcggtgtgcccggcggcggtcggcgtcgacatcggctgcggtatgtcc
gcggtcaagacctcactcaccgcgaacgacctgcccggagatctgtcgcggctgcggtcc
aagatcgagcaggcgatcccggtgggccgggggatgcacgacgatccggtggacccgggc
cgtctccatggattcccgaccgcgacatgggacgacttctgggggcgcttcgacggtgtc
gccgaggcggtcaagttccgtcagggccgggccaccaagcagatgggttcgctcggttcg
ggaaaccacttcattgagttctgtctcgatgacgagggctcggtctggctgatgctccac
tccggctcccgcaacatcggcaaggaactggccgagtaccacatcggcgaggcccggaag
ctcccgcacaaccagaacctggtcgaccgcgacctggccgtcttcatcgcggacaccccg
cagatggcggcgtaccggcacgatctcttctgggcgcaggagtacgcgaagtacaaccgc
tcgatcatgatggcgctcttccaggacgtggtccgccgggagttcaagaaggccaagccg
gtcttcgagccggtgatctcctgccaccacaactacgtggccgaggagcgctacgagggt
gtggacctgctggtcacccgcaagggcgcgatccgcgccggcagcggtgactacgggatc
atcccgggctcgatgggcaccggttcgtacatcgtgcgcggcctggggaacgcgcactcg
ttcaactcggcctcgcacggcgccggccggaggatgagccgcaacgcggcgaagaagcgt
ttctcgacacgggacctggaggagcagacgcggggcgtggagtgccgtaaggactccggc
gtcgtggatgagatcccgggtgcgtacaagccgatcgagaaggtcatcgaccagcagcgg
gacctcgtcgaggtggtggcgaggctcaagcaggtggtgtgtgtgaagggctga
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