Streptomyces huangiella: ABVG11_22860
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Entry
ABVG11_22860 CDS
T11406
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
shug Streptomyces huangiella
Brite
KEGG Orthology (KO) [BR:
shug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shug03021
]
ABVG11_22860
Transcription machinery [BR:
shug03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ABVG11_22860
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
HTH_23
HTH_10
MarR_2
HTH_24
Sigma70_ECF
HTH_Crp_2
HTH_3
DUF7343
MarR
PF0610-like_N
FAM219A
GerE
Cro
Motif
Other DBs
NCBI-ProteinID:
XUZ88778
LinkDB
All DBs
Position
complement(5193895..5194836)
Genome browser
AA seq
313 aa
AA seq
DB search
MSPQLDESRTDPSWSTGVSSTTVPAQFTPDTDTQALAGTALDELPDLSDLPEIPPYETVG
PVDARALSKTLFERLEMLDEGTHEYAYVRNTLVELNLALVKFAASRFRSRSEPMEDIVQV
GTIGLIKAIDRFEPGRGVEFPTFAMPTIVGEIKRFFRDTSWSVRVPRRLQELRLDLAKAG
DELAQSLDRAPTVDELAKRLDISTAEVVEGMAASNAYTASSLDAQPEEDDTEGTLADRIG
YEDHGLEGIEYVESLKPLIAELPPRDRKILSLRFVANMTQSEIGEELGISQMHVSRLLSR
TLRRLRKGLMIEE
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccccagctcgacgaatcgcgtaccgatccttcctggagtaccggcgtctcgtcg
accaccgtacccgcgcagttcacccctgacacggacacccaggcactcgccggaaccgcg
ttggatgaactgccggacctgtccgatctgccggagatacccccgtatgaaacggttggt
ccggtagatgcgagggctctctccaagaccctcttcgaacgcctcgagatgctggacgaa
ggcacccacgagtacgcgtacgtacgcaacacgctcgtcgagctgaacctggcactggtc
aagttcgccgcctcgcgcttccgctcccgcagcgagccgatggaggacatcgtccaggtc
ggcaccatcggactgatcaaggcgatcgaccgcttcgagcccggacgcggtgtcgagttc
cccaccttcgcgatgccgaccatcgtcggcgagatcaagcgcttcttccgggacacgagc
tggtccgtgcgcgtccccaggcggctccaggagctgcggctggacctggccaaggccggt
gacgagctggcgcagtcgctcgaccgcgcccccaccgtggacgagttggccaagcgcctg
gacatcagcaccgccgaggtcgtcgagggcatggccgcgagcaacgcgtacaccgccagc
tcgctggacgcccagcccgaggaggacgacaccgagggcaccctggcggaccggatcggc
tacgaggaccacggtctcgagggcatcgagtacgtggagtccctgaagccgctgatcgcc
gaactgcccccgcgcgaccggaagatcctgtcgctgcgcttcgtggccaacatgacgcag
tcggagatcggtgaagagctgggcatctcccagatgcatgtctcccggctgctgtcgcgc
accctccgtcggctccgcaagggactgatgatcgaggagtag
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integrated database retrieval system
