Streptomyces huangiella: ABVG11_24610
Help
Entry
ABVG11_24610 CDS
T11406
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
shug Streptomyces huangiella
Pathway
shug03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shug00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ABVG11_24610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shug03400
]
ABVG11_24610
Enzymes [BR:
shug01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ABVG11_24610
DNA repair and recombination proteins [BR:
shug03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ABVG11_24610
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
HHH_5
AAA_22
NAT10_TcmA_helicase
PhoH
AAA_16
PIF1
TraI_hel_assoc_N
NPHP3_N
nSTAND3
HTH_IclR
DEAD
AAA
UvrD-helicase
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
XUZ89096
LinkDB
All DBs
Position
5580365..5582605
Genome browser
AA seq
746 aa
AA seq
DB search
MLKLAVVEGVLERITYANEENGYTVARVDTGRGAGDLLTVVGSLLGAQPGESLRMEGRWG
SHPQYGKQFTVENYTTVLPATVQGIRRYLGSGLIKGIGPRIADRITEHFGVETLDVIEQR
PERLIEVPGLGPKRTKMIGAAWEEQKAIKEVMIFLQGVGVSTSIAVRIYKKYGDASISVV
KNEPYRLAADVWGIGFLTADKIAQSVGIPHDSPDRVKAGLQYALSQSTDNGHCYLPEEQL
IADAVKLLQVDTGLVIDCLGELAAEEGVVRERVPAPDGGDPVAAVYLVPFHRAELSLAGQ
VQRLLRTEEDRMPAFQGVDWEKALTWLAGRTGAELAPEQREAVRLALTEKVAVLTGGPGC
GKSFTVRSVVELARAKKAKVVLAAPTGRAAKRLAELTGAEASTVHRLLELKPGGDAAYDR
DRPLDADLVVVDEASMLDLLLANKLVKAVPPGAHLLFVGDVDQLPSVGAGEVLRDLLAPG
GPVPAVRLTRIFRQAQQSGVVTNAHRINEGVPPLTQGLSDFFLFVEDDTEEAGRLTVDVA
ARRVPAKFGLDPRRDVQVLAPMHRGPAGAGALNGLLQQAITPARPDLPERRFGGRIFRVG
DKVTQIRNNYEKGANGVFNGTVGVVTSLDTDEQRLTVLTDEDEEVPYDFDELDELAHAYA
VTIHRSQGSEYPAVVIPVTTGAWMMLQRNLLYTAVTRAKRLVVLVGSRRALGQAVRTVSA
GRRCTALDHRLGGQGRVEDAHRVSER
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgctcaaactcgcggtggtcgaaggggttctggagcggatcacctacgccaatgaggag
aacggctacacggtcgcgcgggtcgacaccggccgtggcgcgggcgatctgctgaccgtc
gtgggctcgctgctgggcgcccagccgggcgagtcactgcggatggagggccgctggggc
tcccatccgcagtacggcaagcagttcaccgtggagaactacaccaccgtcctccccgcc
accgtccagggcatccgccgctatctgggctccggtctgatcaaggggatcggcccgcgg
atcgccgaccggatcaccgagcacttcggcgtcgagaccctggatgtcatcgagcagcgg
ccggagcggctgatcgaggtccccgggctcggccccaagcgcaccaagatgatcggcgcg
gcctgggaggagcagaaggcgatcaaggaggtcatgatcttcctccagggcgtcggcgtc
tccacctccatcgcggtgcggatctacaagaagtacggggacgcctcgatctccgtggtg
aagaacgagccgtaccggctggcggccgacgtctggggcatcggcttcctcaccgccgac
aagatcgcccagtccgtcggcattccgcatgacagcccggaccgggtcaaggccggtctc
cagtacgccctgtcccagtccacggacaacggccactgctatctccccgaggagcaactg
atcgcggacgcggtgaagttgctccaggtcgacaccggcctggtgatcgactgcctgggc
gagctcgccgccgaggagggcgtggtgcgggagcgggtccccgccccggacggcggcgat
ccggtcgcggcggtctatctggtcccgttccaccgcgcggagctctcgctggccggtcag
gtgcagcggctgctgcgcaccgaggaggaccggatgcccgccttccagggggtggactgg
gagaaggcgctgacctggctggccggccgcaccggtgccgagctggcccccgagcagcgg
gaggcggtgcggctggcgctcaccgagaaggtcgcggtgctcaccggcggcccggggtgc
ggcaagtccttcaccgtccggtccgtggtggagctggcccgggccaagaaggccaaggtg
gtgctggcggcccccaccggccgggccgccaagcggctcgccgagctgaccggcgccgag
gcgtccaccgtccaccggctgctggagctcaagcccggcggggacgccgcatatgaccgg
gaccgcccgctggacgccgatctggtggtggttgacgaggcgtccatgctcgatctgctg
ctggccaacaagctggtcaaggcggttccgccgggtgcgcacctgctcttcgtcggcgat
gtggaccagctccccagcgtcggcgccggggaggtgctgcgcgatctgctggcccccggc
ggcccggtccccgcggtgcggctgacccggatcttccgccaggcccagcagtccggtgtg
gtcaccaacgcccaccggatcaacgagggggtgccgccgctcacccaggggctctccgat
ttcttcctcttcgtggaggacgacaccgaggaggccgggcggctcacggtcgatgtcgcg
gcccgtcgcgtgcccgccaaattcggtctggacccccggcgtgacgtgcaggttctcgcc
ccgatgcaccgcggtccggcgggcgcgggcgcactgaacggactgcttcagcaggccatc
accccggcccgcccggacctcccggagcgccgtttcggcggacggatcttccgtgtcggc
gacaaggtgacccagatccgtaacaattatgagaaaggggccaatggggtcttcaacggc
acggttggtgtcgtcacctccctcgacaccgacgagcagcggctgaccgtgctgacggac
gaggacgaggaggtgccgtacgacttcgacgagctggatgagttggctcacgcctatgcg
gtgaccatccaccgctcgcagggcagtgagtacccggccgtcgtgattccggtgaccacc
ggagcctggatgatgctccagcgcaacctgctctacaccgcggtgacgcgcgccaagcgc
cttgtggtgctggtcggctcccgtcgcgcgctcgggcaggcggtgcgtacggtttcggcg
ggaaggcgctgcacggcactggaccaccggctcggcggccaaggacgggtcgaggatgcc
cacagggtttccgaacgatga
DBGET
integrated database retrieval system
