Streptomyces huangiella: ABVG11_30185
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Entry
ABVG11_30185 CDS
T11406
Name
(GenBank) DEAD/DEAH box helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
shug Streptomyces huangiella
Brite
KEGG Orthology (KO) [BR:
shug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shug03019
]
ABVG11_30185
Enzymes [BR:
shug01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
ABVG11_30185
Messenger RNA biogenesis [BR:
shug03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
ABVG11_30185
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
SH3_HelY
DEAD
ResIII
Helicase_C
DEXQc_Suv3
MTR4-like_stalk
nSTAND_NTPase5
AAA_22
nSTAND3
AAA_30
Motif
Other DBs
NCBI-ProteinID:
XUZ90102
LinkDB
All DBs
Position
6859338..6862160
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AA seq
940 aa
AA seq
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MTDELSPAERYAAARVRAAEQATALAPFREMYDFALDEFQIEACKALESGKGVLVAAPTG
SGKTIVGEFAVHLALTQGRKCFYTTPIKALSNQKYADLVKRYGADKVGLLTGDNSVNSEA
PVVVMTTEVLRNMLYAGSQSLLGLGYVVMDEVHYLSDRFRGAVWEEVIIHLPASVTLVSL
SATVSNAEEFGDWLDTVRGDTEVIVSEHRPVPLWQHVLAGRRMYDLFEEKNGQEGDRGGR
REVNPDLVRLARMENSRPGFGRDKRRGRPVREADRERERRQRSRIWTPGRAEVIDRLDAE
GLLPAITFIFSRAGCESAVQQCLYAGLRLNDDAARAQVRSIVEERTAGIPDEDLHVLGYF
EWLEGLERGIAAHHAGMLPTFKEVVEELFTRGLVKAVFATETLALGINMPARSVVLEKLV
KWNGEQHADITPGEYTQLTGRAGRRGIDVEGHAVVLWQRAMDPAALAGLAGTRTYPLRSS
FKPSYNMAVNLVSQFGRHRSRELLETSFAQFQADKAVVGISRQVQRNEEGLEGYRDSMTC
HLGDFDEYARLRRELKDREGELARQGVAQRRAAAAVALEKLRAGDVIHVPTGKFAGLALV
LDPGLPAGRSNGHRGFEHHDGPRPLVLTAERQVKRLASIDFPIPVEPLDRMRIPRSFNPR
SPQSRRDLASALRTKAGHHDVRRHRKERSAAADDTEITRLRAALRAHPCHGCSDREDHAR
WGERYHRLLRDTRQLERRIEGRTNTIARTFDRICALLTELDYLRGDEVTDHGKRLARLYG
ELDLLASECLRDGVWEGLAPAELAACASALVYEARSADDALPPKLPAGRAKEALGEMVRI
WGRLDALEEDHRINQAEGVGQREPDLGFAWAAYRWSSGHGLDEVLREIDMPAGDFVRWTK
QVIDVLGQIAAAAPDGTVARSARRAVDGLLRGVVAYSSVG
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgagctatctcccgccgagcgctatgccgcggcccgggtccgggccgccgag
caggccaccgcgctggcccccttccgagagatgtacgacttcgcgctggacgagttccag
atcgaggcgtgcaaggccctggagtccggcaagggcgtgctggtcgccgcccccaccggc
tcgggcaagaccatcgtgggcgagttcgccgtccacctggcgctgacccagggccggaag
tgcttctacaccacgcccatcaaggcgctgtccaaccagaagtacgccgacctcgtcaaa
cgctacggcgccgacaaggtcggtctgctcaccggtgacaacagcgtcaactccgaggcc
ccggtggtcgtcatgaccaccgaagtgctgcgcaatatgctctacgcgggctcgcagtca
ctgctcggactgggctatgtggtgatggacgaggtccactacctctccgaccggttccgc
ggcgccgtctgggaagaggtcatcatccacctcccggcgtcggtgaccctggtgtcactg
tcggccacggtctccaatgccgaggagttcggcgactggctggacaccgtccgcggtgac
accgaggtgatcgtctccgagcaccgtccggtgccgctgtggcagcacgtgctcgccggg
cgccggatgtacgacctcttcgaggagaagaacggccaggagggcgaccgcggcggccgc
cgtgaggtcaaccccgacctggtccggctggcccggatggagaacagccgccccggcttc
ggccgcgacaagcgccgcggccgcccggtgcgggaggccgaccgggagcgtgagcgccgt
cagcgcagccggatctggacaccgggcagggcggaggtcatcgaccggctcgacgccgag
gggctgttgcccgccatcaccttcatcttcagccgcgcgggctgtgaatcggccgtccag
cagtgcctgtacgcggggctgcggctgaacgacgacgcggcgcgcgcccaggtgcggtcg
atagtcgaggagcgcaccgcgggcatcccggacgaagacctccatgtcctggggtacttc
gaatggctcgagggcctggagcgcggtatcgccgcccatcacgccggaatgctccccacc
ttcaaggaggtggtcgaggagctgttcacccgcggcctggtcaaggcggtcttcgccacc
gagaccctggccctcggcatcaacatgcccgcccgctcggtggtgctggagaagctggtc
aagtggaacggcgaacagcacgccgacatcacccccggtgagtacacccagttgaccggc
cgggccggacggcgcggtatcgacgtcgagggccacgcggtggtgctgtggcagcgcgcc
atggacccggccgcgctcgccgggctcgccggcacccgtacctatccgctgcgttcctcc
ttcaagccgtcgtacaacatggcggtcaacctggtctcgcagttcgggcggcaccgctcg
cgcgaactgctggagacctccttcgcccagttccaggcggacaaggcggtcgtcggcatc
tcccgccaggtccagcggaacgaggaggggctcgagggctaccgcgactccatgacctgc
cacctcggtgacttcgacgaatacgcccggctgcgccgcgagctgaaggaccgggagggc
gagctcgcccggcagggcgtggcccagcgccgcgcggccgccgcggtcgcgctggagaag
ctgcgggcgggcgatgtgatccatgtgcccaccggcaagttcgccggactcgcgctggtg
ctggaccccgggctgcccgcgggccgctccaacggccaccgcggcttcgagcaccacgac
gggccccggccgctggtcctcaccgccgagcgccaggtcaagcggctcgcctcgatcgac
ttccccatccccgtcgaaccgctggaccggatgcggatcccccggtcgttcaatccgcgc
agtccgcagtcccgccgcgatctggcctccgcgctgcgcaccaaggccgggcaccacgat
gtacgccgccaccgcaaggagcgttcggccgccgccgacgacaccgagatcacccggctg
cgggccgccctgcgcgcccatccctgccatggctgctccgaccgtgaggaccacgcccgc
tggggcgagcgctaccaccggctgctgcgcgacaccaggcagctggagcggcgtatcgag
ggccggacgaacaccatcgcccgtaccttcgaccggatctgtgcgctcctgaccgagctg
gactatctgcgcggtgatgaggtcaccgaccacggcaagcggctcgcccggctctacggt
gagctggatctgctggccagtgagtgtctgcgggacggtgtctgggaggggctggccccc
gccgagctggccgcctgcgcctccgccctcgtctacgaggcccgctccgcggacgacgcg
ctgccgcccaagctgcccgcgggccgcgccaaggaggcgctgggcgagatggtgcggatc
tgggggcggctggacgccctggaggaggaccaccggatcaaccaggccgagggcgtcggc
cagcgcgaacccgatctgggcttcgcctgggccgcctaccgctggtcctccggccacggt
ctggacgaggtgctgcgcgagatcgatatgcccgccggtgacttcgtgcgctggaccaag
caggtcatcgatgtgctcgggcagatcgcggccgccgcccccgacggcacggtggcgcgc
agcgcccgccgggcggtcgacgggctgctgcgcggtgtcgtggcgtactcctcggtgggc
tga
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