Streptomyces huangiella: ABVG11_30345
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Entry
ABVG11_30345 CDS
T11406
Name
(GenBank) TerD family protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
shug Streptomyces huangiella
Pathway
shug03030
DNA replication
shug03430
Mismatch repair
shug03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shug00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ABVG11_30345
03430 Mismatch repair
ABVG11_30345
03440 Homologous recombination
ABVG11_30345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shug03032
]
ABVG11_30345
03400 DNA repair and recombination proteins [BR:
shug03400
]
ABVG11_30345
Enzymes [BR:
shug01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ABVG11_30345
DNA replication proteins [BR:
shug03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ABVG11_30345
DNA repair and recombination proteins [BR:
shug03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ABVG11_30345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TerD
RNase_T
BRCT
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
XUZ90129
LinkDB
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Position
6896067..6897899
Genome browser
AA seq
610 aa
AA seq
DB search
MTLPSSRPKWPTLPDYFHDWVLVDVETSGLRPGRDRVLSLAMLTLDAHGHQTGEFSTLLN
PGCDPGPVHIHGLTPERLADAPTFEEVAPQVGALLSSRVMVAHNAQFDYDFLAHEFAHVR
SWAPVSRRLCTLALNRLVGPATSDLKLGTLAAHYGVRQEKAHDARDDVRVLSGILRGSLG
AAERLGLSLPLLECPPRQDYKPYVPKTPCAYRNPGRLEPGGSLVQGMKVAITGDTQISRE
ELVARSVAAGLNMMTSVSGQTSVVVTNDPGSASGKLRRAADEGVPLVDEPTYLRLLGNVQ
PGHAKGTARRRPAAEMPASETTAQPEPGPRVPAPRTAMSVAPTVGTARSLTGRRVLVLGG
THNAAAEARARSVALGASAAVNLSASVTDVVVLPGGEADRRMPRITALGLHVHDADWLLA
PTPALARSAAGNQPDTGEVLVRGAVIDLPGTGTAWTVAATWRQQTVCDVDVVAFAVDAQE
QVPGDEDFIFYGTPEHPDGTVRLATDGPTEQAVITDLERLPVEIHRVVIAAAIDGTATFS
EVGAIEITASCGIGAAPTARATLDAATTERTMILAELYRRGESWRLRAVGQGYDHGLADL
ARGYGVDVTD
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgaccctgccgtcgtcaaggccgaagtggccgaccctgcctgactacttccacgactgg
gtgctggtggacgtggagacctccggactgagaccgggacgggaccgcgtcctgtccctg
gcgatgctcacactggacgcacacggccatcagacgggggagttctccactctcctcaac
ccgggctgcgaccccggtccggtccacatccacggcctcactcccgagcgtctcgccgac
gcccccaccttcgaagaggtcgcgccgcaggtgggggctctgctcagcagtcgtgtcatg
gtcgcccacaacgcgcagttcgactacgacttcctggcccatgagttcgcccacgtccgc
tcctgggccccggtcagcagacggttgtgcacactggccctcaatcgtctggtcgggccc
gcgacgtccgacctcaagctgggcaccctcgctgcgcactacggcgtgcgccaggagaag
gcccacgatgcacgggatgacgtccgggtgctctccggcatcctgcgcggctcgctcggc
gccgccgagcgactgggcttgtccctgccgctgctggagtgcccgccccgccaggactac
aagccgtacgttcccaagacgccctgcgcgtatcgcaatccgggccgtctggagccgggt
gggtcgctggtgcagggcatgaaggtcgccatcaccggggacacacagatctcccgcgag
gaactggtcgcccgctcggtggcggccggcttgaacatgatgacctcggtcagcggtcag
accagcgtcgtcgtcaccaatgaccccggcagcgcatccgggaagctgcgtcgcgccgcg
gacgagggcgttcccctcgtggacgagccgacctacctgcggctgctgggaaatgtacag
cccgggcacgccaagggcaccgcccgtcggcgtcccgcagccgagatgcccgcgagcgag
acgaccgcacagcctgagcccggaccgagggtccctgcaccgcgtacggccatgtcggtc
gcacccaccgtcggtacggcccggtcgctcaccggacgcagggtcctggtcctcggcggc
acccacaacgcggccgcggaggcccgtgcccgttctgttgcccttggtgcgtccgcggcg
gtcaacctctccgccagtgtgaccgacgtcgtggtactgcccggcggcgaagcggatcga
cgtatgccgcgcatcaccgccctcggcctccatgtccacgacgccgactggctgctcgca
cccacgcccgccctggcacggagcgcggccgggaaccagccggatacgggagaggtactg
gtccggggcgccgtcatcgacctgcccggcaccggcacggcctggacggttgcggccaca
tggcgtcaacagaccgtctgcgacgtggacgtcgtcgctttcgcggtcgacgcgcaggaa
caggtgcccggagacgaggacttcatcttctacggcacacccgagcacccggacggcacc
gtgcggctcgccacggacggccccacggagcaagccgtcatcacggacttggagcggctg
cccgtggagatccaccgggtcgtcatcgccgccgcgatcgatggcaccgcgaccttctcc
gaggtcggggccatcgagatcaccgccagctgcgggatcggcgcggctccgaccgcccga
gccaccctcgacgccgccaccacagagcgcacgatgatcctcgctgagctctaccgccga
ggagagagctggcggctgcgcgccgtcggccagggctacgaccatggtctggccgacctc
gcccgcggctacggagtcgatgtcaccgactga
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