Stella humosa: STHU_00040
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Entry
STHU_00040 CDS
T06078
Symbol
cobD
Name
(GenBank) cobalamin biosynthesis protein CobD
KO
K02227
adenosylcobinamide-phosphate synthase [EC:
6.3.1.10
]
Organism
shum
Stella humosa
Pathway
shum00860
Porphyrin metabolism
shum01100
Metabolic pathways
shum01240
Biosynthesis of cofactors
Module
shum_M00122
Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin
Brite
KEGG Orthology (KO) [BR:
shum00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
STHU_00040 (cobD)
Enzymes [BR:
shum01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.10 adenosylcobinamide-phosphate synthase
STHU_00040 (cobD)
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GFIT
Motif
Pfam:
CobD_Cbib
DUF6074
Motif
Other DBs
NCBI-ProteinID:
BBK29370
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All DBs
Position
complement(3754..4749)
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AA seq
331 aa
AA seq
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MLLADPGSVAPLVHLFLALLLDAAVGDPPLLWRLVPHPVVLCGRLITFFDRRLNRPERSE
MARRLRGCFTVLAVVLAAGAVGAVLAWIAGRLRAGPAIEVLAIAILVSQRSLFDHVAAVA
TALDQGGTEAGRAAVAHIVGRSPESLDEHGVARAAIESLAENFSDGVAAPVFWTLLFGLP
GLFVYKAVNTMDSMIGHRTPQYRAFGWAAARLDDVLNLVPARLAGLLVAAAAAVTPAARP
GSALVTMVRDAGKHRSPNAGWPEAAMAGALGLALCGPRRYPGLVVDAPWIGQGRARADSG
DIGRALMVYVRACALLIGAIGLAAVILWWRR
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgctcctcgccgatcctggtagcgtcgccccgctcgtccatctgttcctggcgctgctg
ctcgacgccgcggtcggcgacccgccgctgctgtggcggctggtgccccatccggtcgtc
ctctgcggacggctcataaccttcttcgaccgccgcctcaaccggccagagcgcagcgag
atggcgcgccgcctgcgcggctgcttcacggtgctggcggtcgtgctggcggcgggcgcg
gtgggcgcggtgctggcctggatcgccgggcggctgcgcgcggggccggcgatcgaggtg
ctggccatcgccatcctggtgtcgcagcgcagcctcttcgaccatgtggcagccgtcgcc
acggcactcgaccagggcgggacggaggccggacgcgccgccgtcgcccacatcgtcggc
cgcagcccggagtcgctggacgagcacggcgtcgcccgggccgccatcgaaagcctggcc
gagaacttctcggacggggtcgcggcacccgtattctggaccctgctgttcggcctgccg
ggcctcttcgtctacaaggcggtcaacaccatggacagcatgatcggccaccgcacgccg
caataccgcgcgttcggctgggcggccgcccggctggacgacgtcctgaacctggtgccg
gcgcgcctggccggcctgctggtggccgcggcggcggccgtgacgcccgccgcgcggccg
ggatcggcgctggtcaccatggtgcgggatgcgggcaagcatcgctcgcccaacgccggc
tggccggaagcggcgatggcgggcgcgctgggcctggcgttgtgcgggccgcggcgctat
ccgggcctggtcgtcgatgcgccctggatcggccagggccgggcgcgcgcggacagcggc
gacatcggccgggcgctcatggtctatgtccgggcctgcgccttgctgatcggcgcgatc
gggctggccgcggtcatcctgtggtggcggcgctga
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