Stella humosa: STHU_03280
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Entry
STHU_03280 CDS
T06078
Name
(GenBank) farnesyl-diphosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
shum
Stella humosa
Pathway
shum00900
Terpenoid backbone biosynthesis
shum01100
Metabolic pathways
shum01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
shum00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
STHU_03280
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
shum01006
]
STHU_03280
Enzymes [BR:
shum01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
STHU_03280
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
STHU_03280
2.5.1.29 geranylgeranyl diphosphate synthase
STHU_03280
Prenyltransferases [BR:
shum01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
STHU_03280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
BBK29694
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All DBs
Position
complement(354179..355060)
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AA seq
293 aa
AA seq
DB search
MPVIEKIRTADAGWLRHRVDGRLRELLGAKPGIGLHAAMADATLRGGRRLRATLTLLSCR
AVGGQDEDALDLACAVEMVHSASLALDDLPAMDDASERRGEPSLHRRHGEATTILAAIAL
LARAFEITSACDHARGTDAVARLARTIGEHGMCAGQFEDLVTRRSGRAVGLDVHRIETLH
RRKSGCIVATACELGAVAGGGGVRAADALAEYGMRLGIAYQIIDDLADHARDAAAGQPNY
AATAGAMAARDRVRHLLVEAGRIVRGVGIDPAAIEAYVEGLVAGCGTPDGNPQ
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgatcgagaaaattcgcaccgctgacgccggctggctgcgccaccgggtcgat
ggccggttgcgcgaactgttaggagccaagcctgggattggcctgcacgcggcgatggcc
gacgcgacgctacgcggcggcaggcggctgcgagcgacgcttaccctgctctcctgccga
gcggtcggcggccaggatgaggatgcgctcgacctcgcctgcgcggtggagatggtgcac
tcggcgtcgctggcgctggacgaccttcccgcaatggatgatgccagtgaacggaggggc
gagccctcgctgcatcggcgccatggcgaggcgaccaccattctggcagcgatagcgctg
ctcgcacgcgccttcgagatcacgagcgcctgcgaccatgcccgcgggacggacgccgtg
gcccggctggcacgaacaatcggcgagcatggcatgtgcgccggccagttcgaagacctg
gtgacgcgccgcagcggccgcgcggtcgggctggatgtacaccgcatcgagacgctgcac
cggcgcaaaagcggctgcatcgttgccaccgcgtgtgaactgggcgccgtagccggcggc
ggcggggtgcgggctgccgacgcgctggccgagtatgggatgcgcctcggcatcgcctac
cagattatcgacgatctcgctgaccacgcccgggacgccgcggcaggacaacccaactac
gccgccacggcgggcgcgatggcggcacgggatcgcgttcgtcatctgcttgtcgaggcc
ggtcgcatcgtccgcggggtcggaatcgacccggcagcaatcgaagcttacgtggagggc
ttggtcgccggctgcggcaccccggatgggaacccccaatga
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