Stella humosa: STHU_03960
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Entry
STHU_03960 CDS
T06078
Name
(GenBank) hypothetical protein
Organism
shum
Stella humosa
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4011
MTES_1575
DUF3320
AAA_11
AAA_12
AAA_30
AAA_19
Viral_helicase1
DUF559
AAA_16
DEAD
ResIII
FtsK_SpoIIIE
nSTAND3
Helicase_RecD
AAA_22
SLFN-g3_helicase
AAA_7
Adeno_IVa2
IstB_IS21
DAP3
Motif
Other DBs
NCBI-ProteinID:
BBK29762
LinkDB
All DBs
Position
426172..431775
Genome browser
AA seq
1867 aa
AA seq
DB search
MLPVEFSEAFIVDETGNATAAEPLSIFRSDLPLAAKLERARTELLDLSARNRLLNVPRSS
RSARTIEVVDERSAEVFRLLVRDGRALNFAAGRGAASEDGDEVAPETETAADLAQPEDEG
TDERGVQRRHADTRLQTRLTSAGLQKRLLDLYFDARTLEEEQGVNILFLALGSLKWIDPG
NATLERRAPLILVPVRLERGTAGERFKLRWRQEDQAANLSLEAYLDRVHALAMPPLEPGE
DFDPAAYLAAVAAAVSSKPGWAVLPDDIVLGFFSFSKFLMYRDLDPEVWPADGKLTDLPL
IRGLLADGFEAGRPGIPEDAAIDPHIPPAQMLHIVDSDSSQTLAVHDVRAGRDLIIQGPP
GTGKSQTIANIIASAVADGRTVLFVAEKMAALEVVKRRLDQAGVGDACLELHSNKANKRA
LLDELRRTWELGAPAGDAGDGLNARLEAARDRLNDHAARLHRPHRVAGMTPYQVIGELTR
LAQAGRRPADLVLERPESWSPEDRRQRSALLAELAERVAGIGRPLDHPWHGVGLESVLPT
EVDRLLGRVADLRARLAVLVADQALLAETLGHPPPLGLGGFAPLADLAHRVAGAPPLDAE
ALAAGEWDTRAADVAALLLAGAGYRRHVGELGARVLPAAWTTDLGEARRLLADLPEGFAA
EGFDRIRRLHDLLPRLLQEAGRLARLLGQDGVPESFLAIDRAASTAQRVAVAPEASPEAF
NAAVWDHGVDQAADLVEAVAALDDARRAAGDRVVEAAWSTELAAARQTLAVHGTSFLRTL
NGDWRRASRLVKSVLREPEAGLPEQLALLDTVIAGQAAMARIRDGEAFGRAAFGAHWRGD
RSAAAPLQALVDWMRSLRGLGAEPRLIAARPLDRGAVGVVADRVRTLLDEALPLLRDLWA
DLGTQPDFVFAEAIDAGRADPVRVMEQCSRLAAADADCRAIMAGAPGGRADRLAVLDRVI
DGQVAARSIAAGEALGRACFGQAWAGPQSDWPALAGAHDWIAANPDIRHLAAGLDDRALP
SARARQIEEVQARLLRDLAGLLIDLRADAPALFGGEDALAAPASVVDARLGAWLAHGEQL
SKWVVYRERSGRARAMGLAALVDRLDDGRLAPGDGVPTFEMACYEALLADMVRMEPALGR
FDGQLHGRQVAEFAQLDRQRIAAAAVEVVRAHHRGIPPRDGGAGPLGVLKAEMARRRGHM
PIRQLMHKAAPAIQKLKPVLMMSPLSVAQFLPPGLLTFDLLVMDEASQIQPVDALGAIAR
CRQVVVVGDERQLPPTRFFAKMINEQPDDEDGAQVADIESILGLFTARGLAQRMLRWHYR
SRHQSLIAVSNSQFYENKLFIVPSPYTGEAGMGLRFHPVAGGVFDSANTGTNAVEAKVVA
EAIVDHARRHPGLSLGVATFSVKQRRAIQDQLELLRRLHPETEAFFHSHPSEPFFVKNLE
NVQGDEREVILISVGYARNPQGYLAMRFGPLSADGGERRLNVLISRAKRRCEVFASITDE
DIDLERGRGRGVAAFKLFLHFARTGRLGLAQPTGRDHDSVFEAQVAARLQAMGYQVHPQV
GIAGFFIDLAIADPERPGRYLLGIECDGAAYHAARSARDRDRLRQAVLEDHGWIIHRIWS
TDWFQRPNEQLDRVVAAIEAAKAELDARLELATGPGPAVSLEVVAVEREEATEIALSPAT
APPPVPDAYVEAVVARADGDHELHETPTGLLAELVVQMAAIEGPVHVDEVVVRLRQAWGL
QRAGQRIQQAVERAVAAALADGRIVADGRFLSAPGAPARVRDRGAVQSLSLRRLDMLPPA
EIRQAILETVHTNLGADRDEIAQAVSRRLGFRMTSPQLRECIGFQVDVLAGQGDLVSKGD
LLVVPDV
NT seq
5604 nt
NT seq
+upstream
nt +downstream
nt
atgcttccggttgaattttcggaggcgtttatcgtggacgaaaccggcaacgcgacggcg
gccgagccgctttccatctttcgcagcgacctgccgcttgccgccaagctggagcgcgcg
cgcaccgaactgctcgacctgtcggcccgcaaccggctgctgaacgtcccccgctcgtcg
cgcagcgcacgcacgatcgaggtggtggacgagcggtcggccgaggtctttcgcctgctg
gtgcgggacggccgcgcgctcaacttcgccgccggccgcggtgccgcgagcgaagatggc
gacgaagtggcccccgaaacggagacggcagccgacctggcccagcccgaggacgaaggc
accgacgagcgcggcgtgcagcgccgccatgccgacacccgcctgcagacgcggctgacc
tcggccgggttgcagaagcgcctgctcgacctctatttcgatgcccgcacgctggaggag
gaacagggcgtcaacatcctgttcctggcgctgggcagcctgaaatggatcgatcccggc
aatgccacgctggagcgccgcgcgccgctgatcctggtgccggtgcggctggagcgcggc
acggccggcgagcgcttcaagctgcgctggcggcaggaggaccaggcggccaacctgtcg
ctggaagcctatctcgaccgcgtccacgccctggcgatgccgccgctggagccgggcgag
gatttcgaccccgccgcctacctggccgcggtggccgcggcggtgtcgtccaagccgggc
tgggccgtgctgccggacgacatcgtgctgggcttcttctccttctccaagttcctgatg
tatcgcgacctcgaccccgaggtctggcccgcggacggcaagctgaccgatctgccgctg
atccgcgggctgctggcggacgggttcgaggcggggaggccggggatcccagaggatgcc
gcgatcgacccgcacatcccgcccgcccagatgctgcacatcgtcgacagcgacagctcg
cagacgctggccgtgcacgacgtccgcgccggccgcgacctgatcatccaggggccgccc
ggcaccggaaagtcgcagaccatcgccaatatcatcgcctcggctgtggcggacggccgg
acggtgctgttcgtggccgagaagatggcggcactcgaggtggtgaagcgccgcctcgac
caggccggcgtgggtgacgcctgcctggagctgcacagcaacaaggccaacaagcgcgct
ctgctggacgagttgcgccgtacctgggaactgggggcgccggcgggggatgccggcgac
ggcctgaacgcgcggctggaagcggctcgcgatcggctgaacgaccatgccgcgcgcctg
caccggccgcatcgggtggccggcatgaccccttaccaggtgattggcgagctgacccgc
ctggcgcaggcgggccgtcgcccggccgacctggtgctggagcggccggaatcctggtcg
cccgaggaccgccgccagcgcagcgccctgctggccgaactggccgagcgcgtggccggg
atcggccggccgctcgaccatccgtggcacggcgtcgggctggaatcggtgctgccgacc
gaggtcgatcgcctgctcggccgcgtcgccgacctgcgcgcgcgcctggcggtcctggtg
gccgaccaggcgctgctggccgagacgctgggccatcccccgccgctcggcctgggcggg
ttcgcgccgctggcagacctggcccatcgcgtggcgggagcgccgccgctggatgccgag
gcacttgccgccggggagtgggacacgcgcgcggcggacgtggcggcgctgctgctggcc
ggtgccgggtatcgccgccacgtcggtgaactgggcgcccgggtgctgccggcggcctgg
actacggacctgggcgaggcgcgccggctgctggccgacctgccggaggggttcgcggcc
gagggcttcgaccgcatccgccggctgcacgacctgctgccgcgcctgctgcaggaagcc
ggccggcttgcccggctgttgggccaggacggcgtgccggagagcttcctggccatcgac
cgcgcggccagcaccgcccagcgcgtggcggtcgccccggaggccagcccggaggcgttc
aacgccgcggtctgggaccatggggtggaccaggcggcggacctggtggaagcggtggcg
gccctggacgacgcacgccgggctgccggcgatcgggtggtcgaggccgcctggtcgacc
gagctggccgccgcccggcagacgctggccgtccacggcaccagcttcctgcgcacgctg
aacggcgactggcggcgcgccagccggctggtgaagtcggtgctgcgcgagcccgaggcg
ggcttgccggaacagctcgcgctgctcgacacggtgatcgccgggcaggcggcgatggcc
cgcatccgcgacggcgaggcattcgggcgggccgccttcggcgcccattggcgcggcgac
cggtcggccgcggcccccttgcaggcgctcgtcgactggatgcgcagcctgcggggcctg
ggggcggagccgcggctgatcgcggcccggccgctcgatcgcggcgcggtcggcgtggtg
gccgatcgcgtgcgcaccctgctggacgaggcgctgcccctgctacgcgacctgtgggcc
gatctgggcacgcagcccgactttgtgttcgccgaggcgatcgatgccggccgcgccgac
ccggtccgggtgatggagcagtgcagccggctggcggcggccgacgccgactgccgcgcg
atcatggcaggggcgccgggcggccgggccgaccggctggcggtgctggaccgggtgatc
gacggccaggtggccgcccggtcgatcgccgcgggcgaggcgctgggccgggcctgcttc
ggccaggcctgggccgggccgcaatccgactggccggcgctggccggcgcgcacgattgg
atcgccgccaaccccgacatccgccacctggcggccgggctggacgatcgcgccctgcca
tcggcgcgcgcgcgccagatcgaggaggtgcaggcacggctgttgcgcgacctggccggg
ctgctgatcgacctgcgcgccgatgccccggccctgttcggcggggaggatgcgctggcc
gcgcccgcttccgtggtcgatgcccgcctgggcgcctggcttgcccacggcgagcagcta
tcgaaatgggtcgtctatcgcgagcggtcggggcgggcccgggcgatggggctggctgcc
ctggtcgaccggctcgacgatggccggctggcgccgggggacggcgtgcccaccttcgag
atggcctgctacgaggccctgctggccgacatggtccggatggaacccgcgctcggccgc
ttcgatggccaactgcacgggcgccaggtggcggagttcgcccagctcgaccgccagcgc
atcgccgccgccgcggtcgaggtggtgcgcgcccatcaccgcggcatcccgccgcgcgac
ggcggcgccggaccgctcggcgtgctgaaggccgagatggcgcgccggcgcggccacatg
ccgatccgccagctcatgcacaaggccgccccggcgatccagaagctgaagccggtgctg
atgatgagccccctgtcggtggcgcagttcctgcccccggggctgctgaccttcgacctg
ctggtgatggacgaggcgagccagatccagccggtggatgcgctgggggcgatcgcccgc
tgccgccaggtggtggtggtgggcgacgagcgccagctgccgccgacgcgtttctttgcc
aagatgatcaacgagcagcccgacgacgaggacggcgcccaggtcgccgacatcgagagc
atcctcggcctcttcaccgcccgcggcctcgcccagcgcatgctgcgctggcactatcgc
agccgccaccagtcgctgatcgccgtctccaacagccagttctacgaaaacaagctgttc
atcgtgcccagcccctacaccggcgaggccggcatggggctgcgcttccatcccgtcgcg
ggcggcgtcttcgacagcgccaacaccggcaccaacgcggtggaggccaaggtggtggcc
gaggcgatcgtcgaccacgcccgccggcatccggggctgtcgctgggggtggccaccttc
tcggtcaagcagcgccgggccatccaggaccagctcgaactgttgcgccgcctccacccc
gagaccgaggcgttcttccacagccacccaagcgagccgttcttcgtcaagaacctggaa
aacgtccagggcgacgagcgcgaggtgatcctgatctcggtcggctatgcccgcaacccc
cagggctatctcgccatgcgcttcgggccgctcagcgccgatggcggcgaacggcggttg
aacgtgctgatcagccgcgccaagcgccgctgcgaggtcttcgcgtcgatcaccgacgag
gacatcgacctggagcgcgggcggggccggggcgtcgcggccttcaagctcttcctgcac
ttcgcccgcaccggccgcctcggcctggcgcagccgaccggccgcgaccatgacagcgtc
ttcgaggcgcaggtggcggcccgcctccaggcgatgggctaccaggtgcatccccaggtc
ggcatcgccggtttcttcatcgacctcgccatcgccgatcccgagcggccggggcgatac
ctcctggggatcgagtgcgacggcgcggcctaccacgccgcccgctcggcccgcgaccgc
gaccgcctgcgccaggcggtgctggaggatcacggctggatcatccaccgcatctggagc
acggactggttccagcggccgaacgagcagctcgaccgcgtcgtggccgcgatcgaggcg
gccaaggccgagctggacgcgcggctggaactggcaacgggccccgggccggccgtgtcc
ctggaggtcgtggccgtggagcgcgaggaagcgaccgagatcgcgctttcgcccgccacg
gccccgcccccggtgcccgacgcctatgtcgaggcggtcgtggcgcgcgcggacggcgac
catgagctgcatgagacgccgaccgggctgctggccgagctggtcgtccagatggcggcc
atcgaggggccggtccatgtcgatgaggtggtggtccgcctgcgccaggcctggggcctg
cagcgtgccggccagcgcatccagcaggcggtcgagcgggcggtcgccgcggccctggcg
gacgggcgcatcgtcgccgacggccgcttcctgtcggcgcccggtgcgccggcccgggtg
cgcgatcgtggcgccgtccagtcgctgtcgctgcgccggctcgacatgctgccgccggcc
gagatccgccaggcgatcctggagaccgtgcacaccaacctcggcgccgaccgcgacgag
atcgcccaggccgtgtcgcgccggctcggcttccgcatgaccagcccgcagctacgcgag
tgcatcggcttccaggtcgatgtcctggccggccagggggacctggtttccaagggcgac
cttctcgtcgtccccgacgtatga
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