Stella humosa: STHU_04080
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Entry
STHU_04080 CDS
T06078
Symbol
groL1_1
Name
(GenBank) 60 kDa chaperonin 1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
shum
Stella humosa
Pathway
shum03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
shum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
STHU_04080 (groL1_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shum03019
]
STHU_04080 (groL1_1)
03110 Chaperones and folding catalysts [BR:
shum03110
]
STHU_04080 (groL1_1)
03029 Mitochondrial biogenesis [BR:
shum03029
]
STHU_04080 (groL1_1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
shum04147
]
STHU_04080 (groL1_1)
Enzymes [BR:
shum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
STHU_04080 (groL1_1)
Messenger RNA biogenesis [BR:
shum03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
STHU_04080 (groL1_1)
Chaperones and folding catalysts [BR:
shum03110
]
Heat shock proteins
HSP60 / Chaperonin
STHU_04080 (groL1_1)
Mitochondrial biogenesis [BR:
shum03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
STHU_04080 (groL1_1)
Exosome [BR:
shum04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
STHU_04080 (groL1_1)
Exosomal proteins of other body fluids (saliva and urine)
STHU_04080 (groL1_1)
Exosomal proteins of breast cancer cells
STHU_04080 (groL1_1)
Exosomal proteins of colorectal cancer cells
STHU_04080 (groL1_1)
Exosomal proteins of bladder cancer cells
STHU_04080 (groL1_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
KH_PARP14_2
Motif
Other DBs
NCBI-ProteinID:
BBK29774
LinkDB
All DBs
Position
441092..442735
Genome browser
AA seq
547 aa
AA seq
DB search
MAAKEVKFSSDARDRMLRGVDILANAVKVTLGPKGRNVVLDKAFGAPRITKDGVTVAKEI
ELADKFENMGAQMVREVASKTNDVAGDGTTTATVLAQAIVREGCKAVAAGMNPMDLKRGI
DLAVEAVVADVKKRSKKISTTDEVAQVGTISANGERDIGAMIAKAMQKVGNEGVITVEEA
KSLETELDVVEGMQFDRGYISPYFVTNADKMTTELEAPYILLFEKKLSGLQAMLPVLEAV
VQSGKPLLIVAEDVEGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAMLEDMAILTGGTL
ISEDLGIKLETVTVDMLGKAKRVLINKENTTIIDGAGKKKDIEARCQQIRSQVEETTSDY
DREKLQERLAKLAGGVAVIRVGGATEVEVKERKDRVDDAMHATRAAVEEGIVAGGGTALL
YATKALGSLKPANDDQKVGIDIVRRALQAPVRQIAENAGYDGAVVAGKLLEQKDPNFGFD
AQTGEYRDLVKAGIIDPTKVVRTALQDAASVAGLLVTTEAMVAERPEKKAPPMPGGGGMG
GMGDMDF
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggcagccaaagaagttaagttctcgagcgacgcgcgcgaccggatgctgcgcggcgtc
gacatcctcgccaacgcggtcaaggtgacgctaggtccgaagggccgcaacgtcgtcctc
gacaaggcgttcggcgcgccgcggatcaccaaggacggcgtcaccgtcgccaaggagatc
gagctggccgacaagttcgagaacatgggcgcgcagatggtgcgcgaagtggcctcgaag
accaacgacgtggccggcgacggcacgacgacggcgaccgtgctggcccaggccatcgtg
cgcgagggctgcaaggccgttgccgccggcatgaacccgatggatctgaagcgcggcatc
gacctggcggtcgaggcggtcgtcgccgacgtgaagaagcggtccaagaagatctcgacc
accgacgaagtggcccaggtcggcaccatctccgccaacggcgagcgcgacatcggcgcc
atgatcgccaaggcgatgcagaaggtcggcaacgagggcgtgatcacggtcgaggaggcc
aagagcctcgagaccgagctcgacgtcgtcgagggcatgcagttcgaccgcggctacatc
tcgccgtacttcgtcaccaacgccgacaagatgacgaccgagctcgaggcgccctacatc
cttctcttcgagaagaagctgtcgggtctgcaggcgatgctgccggtgctcgaggcggtg
gtgcagtcgggcaagccgctgctgatcgtggccgaggacgtcgagggcgaggccctggcc
acgctcgtcgtcaacaagctgcgcggcggcctgaaggtcgcggccgtgaaggcgccgggc
ttcggtgatcgccgcaaggcgatgctggaggacatggcgatcctgaccggcggcacgctg
atctccgaagacctcgggatcaagctcgagaccgtcaccgtcgacatgctgggcaaggcc
aagcgcgttctcatcaacaaggagaacacgacgatcatcgacggcgccggcaagaagaag
gacatcgaggcccgctgccagcagatccgctcgcaggtcgaggagaccacctcggactac
gaccgtgagaagctgcaggagcgtctggcgaagctggctggcggcgttgccgtcatccgc
gtcggcggcgcgaccgaggtcgaggtgaaggagcgcaaggatcgcgtcgacgacgcgatg
cacgcgacccgcgcggcggtcgaggaaggcatcgttgccggcggcggcacggctctcctg
tacgccacgaaggcgctgggctcgctgaagcctgccaacgacgaccagaaggtcggcatc
gacatcgtccgccgcgcgctgcaggcgccggtgcggcagatcgccgagaacgccggctat
gacggcgcggtggttgccggcaagctgctggagcagaaggatccgaacttcggcttcgac
gcccagacgggcgagtatcgcgacctggtgaaggccggcatcatcgacccgaccaaggtc
gtgcgtaccgcgctgcaggatgcggcctcggttgccggtctgctcgtgacgacggaggcg
atggtcgccgagcgtcccgagaagaaggcccccccgatgccgggcggtggcggcatgggc
ggcatgggcgacatggatttctga
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