Stella humosa: STHU_05950
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Entry
STHU_05950 CDS
T06078
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
shum
Stella humosa
Brite
KEGG Orthology (KO) [BR:
shum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shum03032
]
STHU_05950 (gyrB)
03400 DNA repair and recombination proteins [BR:
shum03400
]
STHU_05950 (gyrB)
Enzymes [BR:
shum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
STHU_05950 (gyrB)
DNA replication proteins [BR:
shum03032
]
Prokaryotic type
DNA Topoisomerases
STHU_05950 (gyrB)
DNA repair and recombination proteins [BR:
shum03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
STHU_05950 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_insert
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
BBK29961
LinkDB
All DBs
Position
complement(633640..636087)
Genome browser
AA seq
815 aa
AA seq
DB search
MSQPDPATPPQDNAYDASSIQVLKGLEAVRKRPGMYIGDTDDGSGLHHMVYEVVDNAIDE
ALAGHADRVTVTLNGDGSVTVTDNGRGIPVDMHIEEGVSAAEVIMTQLHAGGKFNQNSYK
VSGGLHGVGVSVVNALSEQLDLRIFRGGKEHFMRFRHGDRVEPLAVVGPTDKRGTEVTFL
ASKLTFTKTEFDFATLEHRLRELSFLNSGVTLVLTDARGVDVRTETFHYEGGIAAFVQYL
DRSRKSEHKDPIFIRGERDGVMVEVALQWNDGFHETMLCFTNNIPQRDGGTHLAGFRAAL
TRTVNAYAAESGLAKSEKLQLTGEDMRENLTCVLSIKVPDPKFSSQTKDKLVSSEVRPAV
EAVAADRLRQWFEEHPDGAKVIIKKMYLAAQAREAARKIRETIRNPKGLGLGSLPGKLAD
CQEKDPSLSELFLVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERVRFDKMLSSQEITT
LITALGTGIGDDDPKMGGFDLSKVRYHKIIIMTDADVDGSHIRTLLLTFFFRQMRPLIEA
GYVYIAQPPLYRAKRGNSAVYLKDDRALDEYLVTAGLDDAVFDQHDGARRTGPDLRALVD
EGRQARAMMLSLARRVAHLPTIEQAAIAGVLTPEYMADPARMAEAANIIATRLNGLASDL
ERTWMGQVQEGAIAVQRVVRGVAERYIVEAALVGSGEARRLSAMSADLAASYAGAGTLRI
KDRSYPVTGPLSLVDGVMAEGRRGVTTQRYKGLGEMNPDQLWETTLDQNARALLQVKVSD
EADAKSVFETLMGDEVEPRRDFIQENALKVANLDV
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagcccgaccctgccaccccgccgcaggacaatgcctacgacgccagctcgatc
caggtcctgaaagggctggaggcggtgcgcaagcggccgggcatgtatatcggcgacacc
gatgacggctcgggcctgcaccacatggtctacgaggtggtcgacaacgccatcgacgag
gccttggccggccatgccgaccgggtgacggtgacgctgaacggcgacggctcggtgacg
gtcaccgacaatggccgcggcattcccgtcgacatgcatatcgaggaaggcgtgtcggcg
gccgaggtcatcatgacccagctccatgccggcggtaagttcaaccagaattcctacaag
gtgtcgggcgggctgcacggcgtcggcgtgtcggtcgtgaacgcgctgtccgagcagctc
gacctgcgcatcttccgcggcggcaaggagcatttcatgcgcttccgccacggcgaccgg
gtggagccgctggccgtcgtcggcccgaccgacaagcgcggcaccgaggtcaccttcctc
gcctccaagctcaccttcaccaagaccgagttcgacttcgcgacgctggagcaccggctg
cgcgagctgtccttcctcaattccggcgtgaccctggtcctgaccgacgcgcgcggcgtc
gatgtccgcaccgagaccttccactacgagggcggaatcgcggccttcgtccagtatctc
gaccgctcgcgcaagagcgagcacaaggaccccatcttcattcgcggcgagcgcgacggc
gtcatggtcgaggtggccctgcagtggaacgacgggttccacgagaccatgctgtgcttc
accaacaacatcccgcagcgcgacggcggcacccacctggccggcttccgcgcggccctg
acgcgcacggtcaacgcctatgccgccgagagcggcctggccaagagcgagaagctgcag
ctcaccggcgaggacatgcgggaaaacctgacctgcgtgctgtcgatcaaggtgccggac
ccgaaattctcgtcccagaccaaggacaagctggtctcgtcggaggtccgcccggcggtc
gaggccgtcgccgccgaccgcctgcggcaatggttcgaggagcacccggacggcgccaag
gtcatcatcaagaagatgtacctggcggcccaggcgcgcgaggccgcgcgcaagatccgc
gagaccatccgcaaccccaagggcctgggcctgggcagcctgcccggcaagctggccgac
tgccaggagaaggacccgtccctgtccgagctgttcctcgtcgagggcgattcggccggc
gggtcggccaagcagggccgcgaccggcgcttccaggcgatcctgccgctgcgcggcaag
atcctgaacgtggagcgcgtgcgcttcgacaagatgctgagttcgcaggaaatcaccacc
ctgatcacggcgctgggcaccggcatcggcgacgacgatcccaagatgggcggcttcgac
ctgtcgaaggtgcgctaccacaagatcatcatcatgacggacgccgacgtcgacggcagc
cacatccgcaccctgctgctgaccttcttcttccgccagatgcgcccgctgatcgaggcg
gggtatgtctatatcgcccagccgccgctgtaccgcgccaagcgcggcaactcggccgtc
tacctgaaggacgatcgcgcgctcgacgagtacctggtgacggccgggctcgacgatgcc
gtgttcgaccagcatgacggcgcaaggcggaccggccccgacctgcgggcgctggtggac
gaggggcgccaggcccgggcgatgatgctgtcgctggcccggcgcgtcgcccacctgccg
acgatcgagcaggcggccatcgccggcgtgctgacgcccgaatacatggccgacccggcg
cggatggccgaggccgcgaacatcatcgccacccgcctgaacggcctggcgtccgacctg
gagcgcacctggatgggccaggtgcaggagggtgcgatcgccgtccagcgcgtcgtgcgc
ggcgtggccgagcgctacatcgtggaggccgctctcgtcggctcgggcgaggcgcgacgc
ctttcggccatgtcggccgacctggccgccagctacgccggcgccggcacgctgcgcatc
aaggatcgcagctaccccgtgaccgggccgctgtcgctggtcgacggcgtgatggccgag
ggccgccgcggcgtcaccacccagcgctacaaggggctgggcgagatgaaccccgaccag
ttgtgggagaccacgctggaccagaacgcccgcgccctccttcaggtgaaggtgagcgac
gaggccgatgccaagagcgtgttcgagaccctgatgggcgacgaggtggagccgcgccgc
gacttcatccaggagaatgccctgaaggtcgccaacctcgacgtctag
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