Stella humosa: STHU_07290
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Entry
STHU_07290 CDS
T06078
Symbol
phrB
Name
(GenBank) (6-4) photolyase
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
shum
Stella humosa
Brite
KEGG Orthology (KO) [BR:
shum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shum03400
]
STHU_07290 (phrB)
Enzymes [BR:
shum01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
STHU_07290 (phrB)
DNA repair and recombination proteins [BR:
shum03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
STHU_07290 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
BBK30095
LinkDB
All DBs
Position
772850..774379
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AA seq
509 aa
AA seq
DB search
MAAVRNLILVLGDQLTPSVSSLAGADRSRDRVLMAELRCEATYAWHHKKKIAFLFSAMRH
FAEELRAAGWTVDYMKLGGPDDPGSFTGQLAVAVAEHQPERIVVTEAAEWRVLREMEGWR
ALFSIPVDILPDDRFLCSPDAFRAWAAGRKQLRMEYFYRDMRRRTGLLMDGDQPAGGRWN
FDSENRKPADIDLFMPRPMGRPPDAITREVLELVAARFGEHFGDLEPFWFAVTRADAEAA
FAAFVADALPHFGDYQDAMLAREPFLYHSVIAQYLNCGLLDPLRVCRQVEAAWRAGKAPL
NAAEGFIRQIIGWREYVRGVYWLKMPGYAHSNFFGHTRPLPDFYWTARTDMACVRAVVTQ
TREQAYAHHIQRLMVTGNFALLAGIDPHALHQWYLAVYADAYEWVELPNTVGMSQFADGG
LLASKPYAASGAYINRMSDYCRSCAYEVKQRTGPRACPFNALYWDFIARNRELVGGNPRM
AQMVRTYDNFEPAERQRIGDSAASFLASL
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgttcgcaacctgatccttgtgctcggcgaccagctcacaccgagcgtgtcc
agccttgccggtgcggatcggtcgcgcgaccgcgtgctgatggcggagcttcgctgcgag
gcgacctacgcctggcatcacaagaagaagatcgcgttcctcttctccgccatgcgccat
ttcgccgaggaactgcgggccgccggatggacggtcgactatatgaagctgggcggcccg
gacgatccaggcagcttcaccgggcagctcgccgtcgccgtcgccgaacatcagccagag
cggatcgtcgtcacggaagctgccgagtggcgggtcctgcgggagatggaggggtggcgg
gcgctgttttcgattccggtcgatatccttcccgacgatcgcttcctgtgttcgcccgac
gcgttccgcgcctgggccgccgggcgcaagcagttgcgcatggagtatttctatcgcgac
atgcgccggcggaccggattgctcatggacggcgatcagccggccggcggcagatggaac
ttcgacagcgagaaccggaagccggcggacatcgacctgttcatgccgcgaccgatgggg
cgcccgcccgacgccatcacccgcgaggtgctggaactggtcgcggctcggttcggcgag
cacttcggcgatctcgaacccttctggttcgccgtcacgcgcgccgatgccgaggctgcc
tttgcagcgttcgtcgccgatgccttgccccatttcggcgactaccaggatgcgatgctg
gcgcgcgagccgttcctctaccattcggtcatcgcgcagtacctgaattgcgggctgctt
gacccgttgcgcgtctgccggcaagtcgaggccgcctggcgggctggcaaggcgccgctc
aacgccgccgaaggattcatccggcagatcatcggctggcgcgagtatgtgcgcggcgtc
tactggctgaagatgcccggctacgcgcacagcaacttcttcggtcacacccggccgctg
ccggatttttactggactgcccggaccgacatggcctgcgtccgggcggtggtcacccag
accagggagcaggcctacgcccatcacatccagcgactgatggtcaccggcaatttcgcg
ctgctggccgggatcgacccgcacgcgctgcaccaatggtatctggccgtctatgccgac
gcctatgaatgggtggaactgcccaacaccgtgggcatgagccagttcgccgacggtggc
ctgctcgcttccaagccctatgccgccagcggggcctacatcaaccgcatgtccgactac
tgccgatcatgtgcctacgaggtgaagcagcgcacggggccgcgggcctgcccgttcaac
gccctctattgggatttcatcgcgcgcaaccgtgaactggtcggtggcaatccgcgcatg
gcgcagatggtccggacctatgacaatttcgagccagccgaacgccagcgcatcggcgac
agtgcggccagctttctggcgagcctgtga
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