Allostella humosa: STHU_11140
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Entry
STHU_11140 CDS
T06078
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
shum
Allostella humosa
Pathway
shum02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
shum00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
STHU_11140
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shum02000
]
STHU_11140
Transporters [BR:
shum02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
STHU_11140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_16
ABC_ATPase
AAA_22
AAA_29
AAA_30
AAA_28
TOBE_2
AAA_25
nSTAND_NTPase5
NACHT
nSTAND1
AAA_33
MobB
RsgA_GTPase
DO-GTPase2
Zeta_toxin
AAA_18
AAA_14
AAA_15
AAA_23
AAA
nSTAND3
ORC-CDC6-like
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
BBK30480
LinkDB
All DBs
Position
1159938..1161020
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AA seq
360 aa
AA seq
DB search
MSKAALSYTGVGYRYPGSEAGVFDIDLEIGEGELVAVIGASGSGKTTLLKLLAGFARPDA
GQIRINGADVSLLAPEARRLGVVFQSYALFPHMTALDNVAYPLKVRGLGRTERRRQAADA
LARVGLGDRTGHHPAQLSGGQQQRVALARALVFRPHGLLLDEPLSALDPGLRVEMRDEIL
RVQRDAGIATLLVTHDQEEALSIADRVCVMRQGRLIQVASPRELYDRPADALVAAFVGQS
NLWPAVVAGPGRVRAAIGDLPCDTAGLAPGTAVTVLVRPERVLPAPDPGPSPPPGTFAGR
ILSDRFLGPVRRVDLAVADGVVRLETHSQDAIAAVHVPPAAVRLLPAAAPTHAPTNGGTT
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaggcggcactttcctacaccggcgtcggctaccgctatcccggcagcgaggcc
ggcgtgttcgacatcgacctggagatcggcgagggcgaactggtcgccgtcattggcgcg
tccggttcgggcaagacgacgctgttgaagctgctggcgggcttcgcccggccggatgcc
gggcagatccgcatcaacggtgccgacgtcagcctgctggcgccggaggcgcgccgcctg
ggcgtggtctttcagtcctatgcgctctttccccatatgaccgcgctcgacaatgtcgcc
tatcccctgaaggtgcgcggcctggggcggacggaacggcggcgccaggcggccgacgcc
ctggcgcgggtcgggctgggcgaccgcaccgggcatcatccggcccagctatccggcggg
cagcagcagcgtgtcgcgctggcccgggcactggtgttccgtccgcacggcctgctgctc
gacgagccgctgtcggcgctcgatccgggcctgcgggtggagatgcgcgacgagatcctg
cgcgtccagcgcgacgccggcatcgccaccctgctcgtcacccacgaccaggaggaggcg
ctgtcgatcgccgaccgcgtctgcgtcatgcgccagggacgcctgatccaggtggcgagc
ccgcgcgagctctacgacagaccggccgacgcgctggtcgctgccttcgtcggccagtcg
aacctgtggccggccgtcgtcgccggcccgggccgcgtccgcgccgccatcggcgacctt
ccctgcgacaccgccggcctggcgccgggcacggccgtcaccgtcctggtgcggcccgag
cgcgtgctgccggcgcccgatccggggccgtcgccaccgcccggcacctttgccggccgc
atcctttccgaccggttcctggggccggtgcgccgggtcgatcttgccgtggcggacggg
gtcgtccggctcgagacccattcccaggatgccatcgcggccgtgcatgtcccgcccgcc
gcggtccggctgctgcccgccgctgcccccacccacgcccccaccaacggaggaacgacg
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