Stella humosa: STHU_12480
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Entry
STHU_12480 CDS
T06078
Name
(GenBank) transcriptional regulator
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
shum
Stella humosa
Brite
KEGG Orthology (KO) [BR:
shum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shum03000
]
STHU_12480
Transcription factors [BR:
shum03000
]
Prokaryotic type
Helix-turn-helix
LysR family
STHU_12480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like
HTH_30
V-ATPase_G
HTH_28
Motif
Other DBs
NCBI-ProteinID:
BBK30614
LinkDB
All DBs
Position
1302353..1303210
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AA seq
285 aa
AA seq
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MFQTQLRAFHAVAVEGSFTRAAARLGVTQPTLSAQVKAIEEHCGAALFDRLGRRVVLTDF
GRRLLDVTQRLADAEAAAAELIGDARTLRTGRLRVAADSPYHVAPLLAAFHGRYPGVQAI
LSIGNAGAVLDDLLHFAADVAILADVPDDPRLHAVPCGRHRVVIVVPREHPWAARPMVAP
AELAGQPMVLREAGSVTRRLFEARLAVAGIRPRIVMEIESREAVREAVAAGIGLAVVSEA
EFGADARLAMVPVDDPLLVTREFVVCRTDRRRVAVVRAFLELVPG
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgtttcagacccagctccgcgccttccacgccgtcgccgtcgagggcagcttcacccgc
gcggccgcgcgcctgggcgtcacccagccgacgctgtcggcccaggtgaaagcgatcgag
gaacattgcggggcggccctgttcgatcgcctcggccggcgcgtggtgctgaccgatttc
ggccgccgcctgctcgacgtcacgcagcgcctggccgacgcggaggccgccgcggccgaa
ctgatcggcgacgcgcgcacgctgcgcaccggccgcctgcgggtggcggccgacagcccc
tatcacgtggcgccgctgttggcggccttccatggacgctatccgggcgtgcaggcgatc
ctgtcgatcggcaatgccggcgccgtgctggacgacctgctgcatttcgcggccgatgtc
gcgatcctggccgacgtgcccgacgacccgcgcctgcacgcggtgccctgcggccgccac
cgggtggtgatcgtcgtaccccgcgagcatccctgggccgcccggccgatggtggccccg
gcggaactcgccggccagcccatggtcctgcgcgaggcaggctccgtcacccgccgcctg
ttcgaggcgcgcctggccgtagccggcatccgcccccgcatcgtcatggagatcgaaagc
cgcgaggcggtgcgcgaggccgtcgccgccggcatcggcctggcggtggtgtcggaggcg
gagttcggcgccgacgcgcgcctggctatggtgccggtcgacgaccccctgctggtcacc
cgcgagttcgtcgtctgccgcaccgaccggcggcgggtggcggtggtgcgggcgttcctg
gaactggtgccggggtag
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