Stella humosa: STHU_12640
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Entry
STHU_12640 CDS
T06078
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
shum
Stella humosa
Pathway
shum02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
shum00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
STHU_12640
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shum02000
]
STHU_12640
Transporters [BR:
shum02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
STHU_12640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
BBK30630
LinkDB
All DBs
Position
complement(1320240..1321829)
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AA seq
529 aa
AA seq
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MRATLAAAFLATTALAGLTAAPALAQKVIRATMHADVRTLDPVWTTQTIASIHGNMIFDR
LFASDGNLEPQPQMVDKWTVSDDKKVYTFTLRDGLKFHDGTPVTTKDVIASMKRWGARDG
AGKILFGYTEDLVAKDDKTFEWKLKEPYGLVIETLAKTGTSLPAIMREKEALTDPFQQVK
DMVGSGPFMFKTDEWVPGSKTVYAKFPDYVPRKEPPSGHAGGKVVKVDRVEFIWMSDPQT
QQSALVAGEIDYLEAPQVDFLPILEATPDVKLFNHPASGSMGIIGINHLHPPFNNVKARQ
ALFHILHMPDFLNTFIPDKKLQKLCYSYFGCGTPMETDAGSEVYKSPKKDYKKAEALFKE
AGYNGEPITILHATDHWYINPANLVMIQQLRKAGFLKLDVQALDWGSVVARRAKKEPPAQ
GGWNLYITGTSIVTSANPMTHVAIGMGCEKAWFGWPCDDKFEQLRRDWVAAPDLAKRKAV
AVDLSKRAYDQVPYISFAQWSNPSAYRSDRLSGIVEAPSFPIMWNIEKK
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgagagcgacgctcgccgcagcgttcctggcgaccaccgccctggccggcctgaccgcc
gcccccgccctggcgcagaaggtcatccgcgccaccatgcatgccgacgtgcgcacgctg
gacccggtctggacgacgcagacgatcgcgtcgatccacggcaacatgatcttcgaccgg
ctgttcgccagcgacggcaacctcgagccgcagccgcagatggtcgacaagtggaccgtc
agcgacgacaagaaggtctataccttcacgctgcgcgacggcctgaagtttcatgacggc
acccccgtcacgaccaaggacgtcatcgcctcgatgaagcgctggggtgcccgcgacggc
gccggcaagatcctcttcggctataccgaggatctggtcgccaaggacgacaagaccttc
gagtggaaactcaaggagccctacggcctcgtcatcgagacgttggccaagactggcacc
agcctgcccgcgatcatgcgcgagaaggaagccctgaccgaccccttccagcaggtgaag
gacatggtcgggtccggcccgttcatgttcaagaccgacgagtgggtgcctggcagcaag
accgtctatgccaagttccccgactatgtgccacgcaaggagccgccgtccggccatgcc
ggtggcaaggtggtgaaggtcgaccgcgtcgagttcatctggatgtcggacccgcagacg
cagcagtcggcgctggtcgcgggcgagatcgactatctcgaggccccgcaggtcgacttc
ctgccgatcctcgaggcgacgccggacgtgaagctgttcaaccatccggcttccggctcg
atggggatcatcggcatcaaccacctgcacccgcccttcaacaacgtgaaggcgcgccag
gcgctgttccacatcctgcacatgccggatttcctcaacaccttcatccccgacaagaag
ctgcagaagctctgctactcctatttcggctgcggcacgccgatggagacggatgcgggc
tccgaagtctacaagtcgcccaagaaggactacaagaaggccgaagcgctcttcaaggag
gccggctacaacggcgagccgatcaccattctgcacgccaccgaccactggtacatcaac
ccggccaacctggtgatgatccagcaactgcggaaggcgggcttcctgaagctcgacgtg
caggcgctggactggggctccgtcgtcgcccggcgggcgaagaaggaaccgccggcccag
ggcggctggaacctctacatcaccggcacctcgatcgtgacctcggccaacccgatgacc
catgtcgccatcggcatgggctgcgagaaggcctggttcggctggccctgcgacgacaag
ttcgagcagcttcgccgcgactgggtagccgcaccggacctggccaagcgcaaggcggtc
gcggtcgacctgtccaagcgcgcctacgaccaggtgccctacatctcgttcgcccagtgg
agcaacccgtccgcctatcgctccgaccgtctgtcggggatcgtcgaggcgccgagcttc
cccatcatgtggaacatcgagaagaagtag
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