Stella humosa: STHU_16440
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Entry
STHU_16440 CDS
T06078
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
shum
Stella humosa
Brite
KEGG Orthology (KO) [BR:
shum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shum03021
]
STHU_16440 (rpoH)
Transcription machinery [BR:
shum03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
STHU_16440 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r3
UCR_14kD
wHTH-HSP90_Na-assoc
HTH_25
DUF6561
HTH_11
Motif
Other DBs
NCBI-ProteinID:
BBK31010
LinkDB
All DBs
Position
1742108..1743022
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AA seq
304 aa
AA seq
DB search
MATALALPSVGSDGNLSRYLQEIRRFPMLVQDEEYMLAKRWREHEDTEAAHRLVTSHLRL
VAKIAMGYRGYGLPLSELISEGNVGMMQAVKRFDPERGFRLATYAMWWIRAAIQEYILHS
WSLVKMGTTAAQKKLFFNLRKLKGQMQAIDEGDLTPEQVAKIAKELGVPEADVISMNRRL
GAPDHSLNAPLRTDGDGEWQDWLVDDSDSQETTLAESEEMGKRRKLLGDAMKSLNERERH
ILEERRLKDEPTTLEDLSQQYRISRERVRQIEVRAFEKLQKSIKSAALQQGLTGGGGANL
VQMR
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgcccttgcactgcccagcgtcggaagcgacgggaatctcagccgctatctc
caggagatccggcgattccccatgctggtccaggatgaggagtacatgctcgccaagcgc
tggcgcgagcacgaggataccgaagccgcccaccggctggtgacgagccatctgcgcctc
gtcgcaaagatcgcgatgggctaccgcggctatggcctgccgctctcggagctgatctcc
gagggcaatgtcggcatgatgcaggccgtgaagcgcttcgacccggagcggggattccgc
ctggcgacctacgccatgtggtggatccgcgccgcgatccaggaatacatcctgcattcc
tggtccctggtgaagatggggacgacggccgcccagaaaaagctcttcttcaacctgcgc
aagctgaagggccagatgcaggcgatcgacgagggcgacctgacgcccgagcaggtcgcc
aagatcgccaaggaactgggcgtgcccgaggccgacgtgatcagcatgaaccggcgcctg
ggcgcgccggaccattcgctgaacgcgcccctgcgcacggacggtgacggcgagtggcag
gattggctggtggatgattcggacagccaggagacgacgctggccgagagcgaggagatg
ggcaagcggcgcaagctgctgggtgacgcgatgaagtcgctcaacgaacgcgagcgccac
atcctcgaggagcgccggctgaaggacgagccgacgaccctggaagacttgagccagcag
tatcgcatcagccgcgagcgcgtgcggcagatcgaggtccgtgccttcgagaagctgcag
aagtcgatcaagtcggcggccctgcagcagggcctcaccggcggcggcggcgccaatctg
gtgcagatgcgctga
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