Stella humosa: STHU_19270
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Entry
STHU_19270 CDS
T06078
Symbol
aspS
Name
(GenBank) aspartate--tRNA(Asp/Asn) ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
shum
Stella humosa
Pathway
shum00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
shum00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
STHU_19270 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
shum01007
]
STHU_19270 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shum03016
]
STHU_19270 (aspS)
03029 Mitochondrial biogenesis [BR:
shum03029
]
STHU_19270 (aspS)
Enzymes [BR:
shum01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
STHU_19270 (aspS)
Amino acid related enzymes [BR:
shum01007
]
Aminoacyl-tRNA synthetase
Class II (A)
STHU_19270 (aspS)
Transfer RNA biogenesis [BR:
shum03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
STHU_19270 (aspS)
Prokaryotic type
Other AARSs
STHU_19270 (aspS)
Mitochondrial biogenesis [BR:
shum03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
STHU_19270 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
BBK31293
LinkDB
All DBs
Position
2027730..2029514
Genome browser
AA seq
594 aa
AA seq
DB search
MHAYRTHTCGQLRAGDVGGQVRLSGWVHRKRDHGQLVFIDLRDHYGITQCVVDISSSLFA
AVDTLRVESVITVTGKVVARSAETTNAKLDTGAIELQIAELTVQSVADTLPMPVNADADY
PEDIRLRYRFLDLRREAVHRNIMLRSKVIASIRRRMIEQGFAEFQTPILTSSSPEGARDF
LVPSRMHPGQFYALPQAPQQFKQLLMVAGFDRYFQIAPCFRDEDSRADRSPGEFYQLDFE
MSFVTQEDVFRTIEPVLSGVFDEFSGDRAVTPPPFPRIPFDEAMLKYGSDKPDLRNPLVI
EDISAIFAKSDFQVFVKIVGAGGVVRAIRAPGAAARPRSFFDKLNDWARGEGAPGLGYIT
LADGEAKGPIAKFLSAERVAEIRAATGAVDGDAVFFVGDKKGPAAKLAGAARNRIGQEMG
LYEEGTFRFCWITDFPMYELDEKTNQIVFSHNPFSMPQGELEALETMNPLDIKAFQYDIV
CNGVELSSGAIRNHKPEIMYKAFGIAGYSREDVEARFGGMLAAFKFGAPPHGGSAPGIDR
IVMLLADEPNIREIIAFPLNQQAQDLLMQAPAAVPAERLKELHIRLDLPPIKKP
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcctatcgcacgcatacctgcggccagctccgcgccggcgacgtcggcggccag
gtccgcctttccggctgggtccaccgcaagcgcgaccacggtcagctcgtcttcatcgac
ctgcgcgaccattacggcatcacgcagtgcgtcgtggacatctcgagcagtctctttgcc
gcggtcgacaccctgcgggtcgaaagcgtcatcaccgtcaccggcaaggtggtggcccgc
tctgccgagacgaccaacgccaagctcgacaccggcgccatcgagctgcagatcgccgag
ctgacggtgcagtcggtggccgacacgctgccgatgccggtcaatgccgatgctgactat
cccgaggacatccgcctgcgctaccgcttcctcgacctgcggcgcgaggcggtgcatcgc
aacatcatgctgcggtccaaggtgatcgccagcatccggcggcgcatgatcgagcagggg
ttcgcggaattccagacgccgatcctgacctcgagctcgcccgagggcgcgcgcgacttc
ctggtgccgagccgcatgcatccggggcagttctatgccctgccgcaggcgccccagcag
ttcaagcagctgctgatggtggcgggcttcgaccgctatttccagatcgcgccgtgcttc
cgcgacgaggacagccgcgccgaccgctcccccggtgagttctaccagctcgatttcgag
atgtcgttcgtcacccaggaagacgtcttccgcacgatcgagccggtgctgtcgggcgtc
ttcgacgagttctcgggcgaccgcgccgtcaccccgccgccattcccgcgcatccccttc
gacgaggcgatgttgaagtacgggtcggacaagcccgacctgcgcaacccgctggtgatc
gaggacatctcggccatcttcgccaagtcggacttccaggtcttcgtgaagatcgtgggt
gccggcggcgtcgtccgcgcgatccgcgcgccgggggcggctgcccgcccgcgcagcttc
ttcgacaagctgaacgactgggcccgcggcgaaggtgcgccgggcctcggctacatcacg
ctggccgacggcgaggccaaggggccgatcgccaagttcctgtcggccgagcgggtggcc
gagatccgggcggcgaccggtgccgtcgacggcgacgcggtcttcttcgtcggcgacaag
aaggggccggcggccaagctggcgggggcggcacgcaaccgcatcggccaggagatgggc
ctctacgaggaaggcaccttccgcttctgctggatcaccgacttcccgatgtacgagctg
gacgagaagaccaaccagatcgtcttctcgcacaaccccttctccatgccccagggcgag
ctggaagcgctggagacgatgaacccgctggatatcaaggccttccagtacgacatcgtc
tgcaacggggtagagctgtcgagcggcgccatccgcaaccacaagcccgagatcatgtac
aaggccttcggcatcgcgggctattcgcgcgaggatgtcgaggcgcgcttcggcggcatg
ctggcggccttcaagttcggcgccccgccgcatggcggctcggccccgggcatcgaccgc
atcgtcatgctgctggccgacgagcccaacatccgcgagatcatcgccttcccgctgaac
cagcaggcgcaggacctgctgatgcaggccccggccgcggtcccggccgagcggctgaag
gaactgcatatccgtctcgacctgccgccgatcaagaagccctga
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