Stella humosa: STHU_27630
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Entry
STHU_27630 CDS
T06078
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
shum
Stella humosa
Pathway
shum02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
shum00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
STHU_27630
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shum02000
]
STHU_27630
Transporters [BR:
shum02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
STHU_27630
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_1
SBP_bac_11
TAT_signal
Motif
Other DBs
NCBI-ProteinID:
BBK32129
LinkDB
All DBs
Position
complement(2915853..2916905)
Genome browser
AA seq
350 aa
AA seq
DB search
MSASNGWTRREFLAGSAAAAALAMGGLPARAASCSQVVVGTWGGDYQRLLSAHIDKPLMD
PQRIESVQDVGTSSVRKTKLLAGRASRRAAMDIACLSDLDTYEMNEAGVLAPIDTQRLPS
HVHLLKPLVRPFAVAHIYSAKVIVYNPAKIPVAPQSFNDLWDPKYKGRVGLVDGHFAQNI
ESAALINGGSMSNYEPGKAKLLELKKLSEPKVYPSNEALAAALKGEEVWITLMFKARGFM
WKKAGIPVESATPKEGATPYISDLAVARNAENAECAWRYLEAALKPEAQVGFADQMGYLP
TVRNAKLPADLQKEIGFSDAEIAAFNMPDYGYNAKNAAQLLDWWNKSFKA
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcatcgaacggttggacgcggcgtgaattcctggcgggctcggcggccgccgcc
gccctggcgatgggcgggctgcccgcgcgtgccgcatcctgcagccaggtcgtcgtcggc
acctggggcggcgactatcagcgcctgctgagcgcccatatcgacaagccgctgatggac
ccgcagcggatcgagtccgtccaggacgtcggcacctcgtcggtgcgcaagaccaagctg
ctggccggccgcgcctcgcgccgggccgccatggacatcgcctgcctcagcgacctcgac
acctacgagatgaacgaggcgggggtgctggcgccgatcgatacccagcgcctgccgagc
catgtccacctgctgaagccgctggtccgccccttcgcggtggcgcacatctattcggcc
aaggtgatcgtctacaacccggccaagatcccggtcgcgccgcaatccttcaacgacctt
tgggacccgaaatacaagggacgggtcggcctggtggacggccacttcgcccagaacatc
gaatcggcagccctgatcaacggcggcagcatgtcgaactacgagcccggcaaggccaag
ctgctggagctgaagaagctgtccgagcccaaggtctacccctcgaacgaggcgctggcc
gccgccctgaaaggcgaggaggtgtggatcacgctgatgttcaaggcgcgcggcttcatg
tggaagaaggctggcattccggtcgagagcgccacgcccaaggaaggtgccaccccctac
atctctgacctggcggtcgcccgcaacgccgagaacgcggagtgcgcctggcgctacctg
gaggcggccctgaagcccgaggcccaggtcggcttcgccgaccagatgggctacctgccg
acggtgaggaacgccaagctgccggccgacctgcagaaggagatcggcttctccgacgcc
gagatcgccgccttcaacatgccggactatggctacaacgcgaagaatgcggcgcagcta
ctcgattggtggaacaaatccttcaaagcgtag
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