Stella humosa: STHU_29540
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Entry
STHU_29540 CDS
T06078
Name
(GenBank) peptide ABC transporter
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
shum
Stella humosa
Pathway
shum02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
shum00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
STHU_29540
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shum02000
]
STHU_29540
Transporters [BR:
shum02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
STHU_29540
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
BBK32320
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All DBs
Position
3104045..3105634
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AA seq
529 aa
AA seq
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MTRRPLLLAAALVATTAIVPAMAQTPRDAVSILVRNDSVGFDPHRVTGRGAAEVLFMLTD
TLVALEDDQKTLHPLLAKSWTLSPDGLTYTFQLREDVRFCNGKPLTADDVVYSLTRLTAP
ETRSPAAWRAGKVKSITAKGPHTVEYVLERPYNELLLQLAQSFGAIIDKDDVEKQGRDFG
VKGLNGTGPFCWAEWRPRSEFTLTRHEAYRWGPAFYENAGPAHAARVVWKVIPEETSIVA
AMQTGAGDVTYVAPEWAVEQLKKDPRLTLAMPRVSNYSAFLGMRTNKEMTGDARVRRAIV
HAIDREELNKRFWFGQAKASETYVSPGTLDWNGDVKATYDVDAANRLLDEAGWAKGADGF
RAKDGKRLAPKLVAAGTPGWRTRSEAIQGYLKRVGIDLQILLPEPALAMAQINSSPDYDM
YALFAPYGTSGEALMVFHSQGIPAPNRVHWKDAETDRLLDAGQVALTDADRAAAYAKVQR
IIAENALTVPLAHEQLFLFSNKQRVTGVKVHGIYNSGIYKGLDMKLVAR
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgacccgtcgtcccctgctgctcgccgccgccctcgtggcgacgaccgccatcgtgccc
gccatggcgcagaccccgcgcgacgcggtcagcatcctggtgcgcaacgattccgtcggc
ttcgacccgcaccgcgtcaccgggcgcggggcggctgaggtgctgttcatgctgaccgac
acgctggtggcactggaggacgatcagaagaccctgcacccgctgctggccaagtcctgg
accctgtcgccggacgggctgacctacaccttccagcttcgcgaggacgtgcgcttctgc
aacggcaagccgctgaccgccgacgacgtggtctattcgctgacccggctgaccgcgccc
gagacccgctcgcccgccgcctggcgcgccggcaaggtgaagtcgatcaccgccaagggg
ccgcacacggtcgagtatgtgctggaacggccgtacaacgagttgctgctgcaactggca
cagagcttcggcgccatcatcgacaaggacgacgtcgagaagcagggccgcgacttcggc
gtgaagggcctgaacggcaccggccccttctgctgggccgaatggcggccgcgcagcgag
ttcacgctgacccggcacgaggcctatcgctggggtcccgccttctacgagaacgccggt
ccggcccacgccgcccgcgtcgtctggaaggtcatcccggaggagaccagcatcgtggcc
gccatgcagaccggcgccggcgacgtcacctatgtcgcgcccgaatgggcggtcgagcag
cttaagaaggacccgcggctgacgctcgccatgccgcgcgtgtcgaactacagcgccttc
ctcggcatgcggaccaacaaggagatgaccggcgacgcacgggtgcgccgggcgatcgtc
catgccatcgaccgcgaggagttgaacaagcgcttctggttcggccaggccaaggcgtcc
gagacctatgtcagcccgggcacgctcgactggaatggcgacgtcaaggcaacctacgac
gtcgatgccgccaaccgcctgctggacgaggccggctgggccaagggcgccgacggcttc
cgcgccaaggacggcaagcgcctggcgcccaagctggtcgcggccggcacacccggctgg
cgcacccggtccgaggcaatccagggctatctgaagcgggtcgggatcgacctgcagatc
ctgctgccggagccggcgctggcgatggcgcagatcaactcctcgcccgactacgacatg
tatgccctgttcgccccctacggcacgtccggcgaggcgctgatggtgttccattcgcaa
ggcatccccgcccccaaccgggtgcattggaaggatgcggagacggatcggctgctggat
gcgggccaggtggcgctgaccgacgccgaccgcgcggccgcctatgccaaggtgcaacgc
atcattgccgagaacgcgctgacggtgccgctggcccacgagcagcttttcctcttcagc
aacaagcagcgggtgaccggggtcaaggtgcacggcatctacaattccggcatctacaag
ggcctggacatgaagctcgtcgccaggtga
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