Stella humosa: STHU_35190
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Entry
STHU_35190 CDS
T06078
Name
(GenBank) hypothetical protein
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
shum
Stella humosa
Brite
KEGG Orthology (KO) [BR:
shum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shum03032
]
STHU_35190
03400 DNA repair and recombination proteins [BR:
shum03400
]
STHU_35190
Enzymes [BR:
shum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
STHU_35190
DNA replication proteins [BR:
shum03032
]
Prokaryotic type
DNA Topoisomerases
STHU_35190
DNA repair and recombination proteins [BR:
shum03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
STHU_35190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
BBK32885
LinkDB
All DBs
Position
3713193..3714221
Genome browser
AA seq
342 aa
AA seq
DB search
MPRDGDILPEAVVEALEGSGLVHSSDDEPGIARRRRGRGFAYLRPDGSPIKDARTLARIR
ALAIPPAYRSVWICPRGDGHLQATGRDARGRKQYRYHPDWRQVRDQAKFGRMAAFGRALP
AIRAQVAADLARPELTKAKVVAGVVRLLERTLIRVGNDRYAAENGSFGLTTLRKRHAAVA
GDRIGLEFRAKGGRLHATELADRRIARLVAACRELPGQRLFQYLDDDGQRHPVGSEDVNL
YLKEATGQDFSAKDFRTWAGTLLAACHLADAERGLSQTAARRIVMDCVRGVAAKLANTPA
VCRKCYIHPGVLDAYVEGRLPRRCADEKAMLRLLGRLARAQA
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgccccgcgatggcgacatcctgcccgaggccgtcgtcgaggcgctggagggcagcggc
ctcgtccatagcagcgacgacgaacccggcatcgcgcgccgccgccggggccgcggcttc
gcctatctccgccccgacggatcgcccatcaaggacgcgcgcacgctggcgcgcatccgg
gccttggccatcccgcccgcctatcgcagcgtctggatctgcccgcgcggcgacggccac
ctgcaggcaaccgggcgcgacgcccgcgggcgcaagcaataccgctatcaccccgactgg
cggcaggtgcgtgaccaggcgaagttcggccgcatggccgcattcggccgggccttgccg
gcgatccgcgcccaggtggcggccgacctcgcgcggcccgaactgaccaaggccaaggtg
gtggccggcgtcgtccgcctgctggagcgcacgctgatccgggtcggcaacgaccgctac
gcggccgagaacggcagcttcggcctgaccacgctgcgcaagcgccacgccgccgtggcc
ggcgaccgcatcgggctggagttccgtgccaagggcggccggctgcatgcgaccgaactg
gccgaccggcgcatcgcccggctggttgccgcctgccgcgagctgccggggcagcgcctg
ttccagtatctcgatgacgacgggcaacgccatccagtcggctcggaggacgtgaacctc
tacctgaaggaagcgaccggccaggacttctccgccaaggatttccgcacctgggccggc
acgctgctggcggcctgccatctggccgacgccgagcgcggcctgtcgcagacggccgcc
cgccgcatcgtcatggattgcgtgcgcggggtggcagcgaagctggccaacacgccggcc
gtctgccgcaaatgctacatccatccgggcgtgctcgacgcctatgtcgaggggcgcctg
ccgcgccgctgcgccgacgaaaaggcgatgctgcggcttctcggccggctggcccgcgcc
caggcctga
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