Stella humosa: STHU_38940
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Entry
STHU_38940 CDS
T06078
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
shum
Stella humosa
Pathway
shum02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
shum00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
STHU_38940
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shum02000
]
STHU_38940
Transporters [BR:
shum02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
STHU_38940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
BBK33260
LinkDB
All DBs
Position
4105127..4106170
Genome browser
AA seq
347 aa
AA seq
DB search
MAQMMTRLGIAALAVAGMAATATARDLTVVAWGGSTQAAQKKVYYGPFTAATGIPLLEDS
WSGGVGVLRAKVQAGQPNWDVIQVESDELHIGCDEGLYEKPDWAALGGKGAFMKEAVSEC
GVGSVVWSVALAYNADRLKEAPKSWADFWNVEKFPGKRTMRRGPKYNLEFALMADGVPQA
DVYKVLRTPAGVERAFKKLDELKPNIVWWTAGAQPGQLMASGEVSMAASYTSRMFAAQRD
DKRNFQVVWNGSIYAIDHWVVLRGSPNRDNAMKMVQYMTRPEIQKQLPPLSFQGATNLEA
AKQTDAAAAPSLPTFPANLAVSGSLDVEFWVDNIEQLTQRFNAWASK
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggcacaaatgatgacgaggctcggcatcgcggcgctcgccgtggccgggatggcggcg
accgcgaccgcccgtgacctgaccgtcgtggcctggggcggctccacccaggcggcccag
aagaaggtctattacgggcccttcacggccgcgaccggcatcccgctgctggaggattca
tggtcgggcggcgtcggcgtgctgcgcgccaaggtgcaggcgggccagcccaactgggac
gtcatccaggtcgaatccgacgagctgcacatcggctgcgacgagggcctctacgagaag
ccggactgggcggcactcggcggcaagggcgccttcatgaaggaggccgtcagcgagtgc
ggcgtcggctccgtcgtctggtcggtggccctggcctacaacgccgaccgcctgaaggaa
gcgcccaagtcctgggcggacttctggaacgtcgagaagttccccggcaagcgcaccatg
cgccgcgggcccaagtacaacctcgaattcgcgctgatggccgacggcgtgccgcaggcc
gacgtctacaaggtgctgcgcaccccggccggcgtcgagcgcgccttcaagaagctggac
gagctgaagcccaacatcgtgtggtggacggccggcgcccagcccggccagctcatggcc
tcgggcgaggtctccatggccgcctcctacaccagccgcatgttcgccgcccagcgcgac
gacaagcgcaacttccaggtcgtctggaacggcagcatctatgcgatcgaccattgggtc
gtgctgcgcgggtcgcccaaccgcgacaacgccatgaagatggtccagtacatgacccgg
cccgagatccagaagcagctaccgccgctgtcgttccagggtgcgaccaacctggaagca
gccaagcagaccgacgccgcggccgctcccagcctgcccaccttcccggccaacctcgcc
gtgtcgggctcgctcgacgtggagttctgggtcgacaacatcgagcagcttacccagcga
ttcaacgcctgggcctcgaagtag
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integrated database retrieval system
