Allostella humosa: STHU_40810
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Entry
STHU_40810 CDS
T06078
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
shum
Allostella humosa
Pathway
shum03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
shum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
STHU_40810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shum03400
]
STHU_40810
Enzymes [BR:
shum01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
STHU_40810
DNA repair and recombination proteins [BR:
shum03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
STHU_40810
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
BBK33447
LinkDB
All DBs
Position
4309017..4309835
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AA seq
272 aa
AA seq
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MKIATFNVNGINGRLSVLLRWLAEAKPDVVCLQELKAPQTRFPATALRDAGYGAIWHGQK
SWNGVAILARGQDPLETRRGLPGDPEDDQSRYIEAAVDGVLVGCLYMPNGNPAPGPKFEY
KRRWFDRLTAYAEELLALEVPIVLAGDYNVMPTDIDVYNPDRWRDDALFRPEIRDAFAEL
AAQGWTDAIRTLHPDVRIYTFWDYFRNAWGRDAGLRIDHLLLSSAIAAHLSAGDVDRHVR
GWDRASDHAPVWVQLDLNLSGHRSRPARRARR
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgccaccttcaatgtgaacggcatcaacggccggctatcggtcctgctccgt
tggctggcagaggccaagccggatgtcgtctgccttcaagagttgaaggcgccccaaacc
cggttcccagccacggccctgcgcgatgcgggctatggcgcgatctggcatgggcaaaaa
agttggaacggcgtggctatcctcgcccgtggacaagatccgcttgagacgcgacgcggc
ctacccggcgaccccgaggacgaccagagccgctacatcgaggcggccgtggatggtgtc
ctggtcgggtgcctgtacatgcccaatggcaatcctgcacccggaccaaagttcgaatac
aagcgtcgctggttcgaccggctgacggcctatgccgaggaactcctcgctcttgaagtg
ccgattgttctggccggcgactacaacgtcatgccgacggatatcgacgtctacaaccct
gatcgatggcgcgacgacgcattgtttcgtcctgagattcgcgatgcattcgccgagttg
gcagcacaggggtggacagatgcgatccggacgctgcatccagacgttcgcatctatacg
ttctgggactatttccggaacgcctggggcagagatgcaggtctgcgcatcgatcatctg
ctgctaagctcagcaatcgctgcccacctgtccgcaggggatgtcgaccgccacgttcgc
ggatgggacagagccagcgatcacgcgcctgtctgggtccaattggacctcaacctgtca
ggtcatagatcaaggccagcccggcgagcgcgacgctga
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