Allostella humosa: STHU_41740
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Entry
STHU_41740 CDS
T06078
Name
(GenBank) hypothetical protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
shum
Allostella humosa
Brite
KEGG Orthology (KO) [BR:
shum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shum03400
]
STHU_41740
DNA repair and recombination proteins [BR:
shum03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
STHU_41740
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HerA_C
DUF87
FtsK_SpoIIIE
AAA_10
AAA_22
ResIII
Hydrolase
TrwB_AAD_bind
GGDEF_2
AAA_30
AAA_25
T2SSE
AAA_7
Motif
Other DBs
NCBI-ProteinID:
BBK33540
LinkDB
All DBs
Position
4406226..4407830
Genome browser
AA seq
534 aa
AA seq
DB search
MTGIFVGKGTIPLELLPRLANRHGLIAGATGTGKTVTLQILAEGFSRIGVPVFMADVKGD
LAGMSRAGEPKPKLDDRAAALGIQLDHRAFPVVFWDLEGKNGHPVRATISDLGPLLLARL
LGLNDIQTGVLNLAFKLADDEGLLLLDLKDLRAMLVFVAENARALTLRYGSVSSASVGAI
QRALLALETQGADRFFGEPMLDIADLLALDAAGAGQISILAADRLMQQPQLYGTFLLWLL
SELFEQLPEVGDPDRPRLVFFFDEAHLLFEDAPKALVDKVEQVVRLIRSKGVGVYFVTQN
PLDIPESVLAQLGNRVQHALRAFSPRDQRAVRAAAETFRTNPRLDTAAVITEMGVGEALV
SLLDEKGRPGIVERALIRPPDSRLGPITPAERAQTIAASPVGDRYDRTIDRESAYERLAA
QHEQPPPTTAIAATRPPPIPPGAAHGASPRRAPTRTNDRPVAPPGGRRRRGRHRPEPASP
RRKPSSRAWRAASAAASAGRSCAACWVRSCGVDERPMGGGHRVATRPPQIRLFS
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgacgggcatattcgttggcaagggcacgatcccgctggagctgctgccgcgcctggcc
aatcgccacgggctgatcgcgggtgccaccggcaccggcaagaccgtgaccttgcagatc
ctggccgagggcttctcgcgcatcggcgtgccggtcttcatggccgacgtgaagggcgac
ctggccgggatgtcgcgggcgggcgagcccaagcccaagctcgacgaccgggcagccgca
ctcggcatccagctcgaccaccgggcctttccggtcgtgttctgggacctggagggcaag
aacggccacccggtgcgggccaccatctccgacctcgggccgctgctgctggcgcgcctg
ctcgggctgaacgacatccagaccggcgtcctcaacctcgccttcaagctggccgacgac
gagggcctgctgctgcttgacctgaaggacctgcgcgcgatgctggtcttcgtggccgag
aacgcccgcgcgctcaccctgcgctatggcagcgtgtcgtcggcctcggtcggcgccatc
cagcgcgcgctgctggcgctggagacgcagggcgccgaccgttttttcggcgagccgatg
ctggacatcgccgacctgctggcactggatgccgcgggcgccgggcagatcagcatcctg
gccgccgaccggctgatgcagcagccgcagctctacggcaccttcctgctgtggctgctg
tcggagctgttcgagcagttgccggaggtgggcgaccccgaccggccgcggctggtcttc
ttcttcgacgaggcgcatctcctcttcgaggacgcgccgaaggccctggtcgacaaggtc
gagcaggtggtgcggctgatccgctccaagggcgtcggggtctatttcgtgacccagaac
ccgctcgacatcccagaatccgtgctggcccagcttggcaaccgggtgcagcatgcgctt
cgcgccttcagtccgcgcgaccagcgcgcggtgcgggccgccgccgagacgttccgcacc
aacccgcgcctggacacggccgccgtcatcaccgagatgggggtgggcgaagccctggtc
tcgctgctggacgaaaagggccggccggggatcgtcgagcgcgccctgatccgcccgccc
gactcgcgcctggggccgatcacgccggccgaacgggcccagacgatcgccgccagcccg
gtcggcgaccgctacgaccggaccatcgaccgcgagtcggcctacgagcggctggcggcc
cagcatgagcagccgcccccgacgaccgcgatagccgcgacccgcccgcccccaatccca
cccggcgcggcccatggagcgagcccgcgccgcgcgccgacccgtacgaacgaccggccg
gtcgccccgccgggcgggcgccgtcgtcgcggccggcaccggccagaacccgcgagtccc
cggaggaagccttcttcaagagcatggcgcgcagcgtcggcagcagcctcggccggcaga
tcgtgcgcggcgtgctgggttcgatcctgcggcgttgacgagcgaccgatgggcggcgga
caccgcgttgccacgcggccgccacaaattcgccttttctcgtga
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